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Identifier: 16519659

GI number: 16519659

Start: 267044

End: 269128

Strand: Direct

Name: Not Available

Synonym: NGR_a02040

Alternate gene names: NA

Gene position: 267044-269128 (Clockwise)

Preceding gene: 16519902

Following gene: 16519936

Centisome position: 49.81

GC content: 65.08

Gene sequence:

>2085_bases
ATGTCTACTGACATCGCCATAAAGGTTGACGCCGACCATCTGCGGCGTGATGCATTCCTCTACGTGCGTCAGTCCTCGCT
TCGTCAGGTGTTCGAGAACACCGAGAGCACCAAGCGGCAATACGCCCTGCGCGATCGCGCCGTGGCGCTGGGCTGGCCGA
TCGAACGTGTCCACGTCATCGATAGCGACCTCGGCCTCTCCGGCGCGCAGTCGCAGGACCGCGACGGCTTCCAGCACCTG
GTGAGCGAAGTGGCGATGGGACATGCAGGGATCGTGCTGGGGCTGGAAGTGTCGCGCCTGGCACGCAACAATGCCGACTG
GCACCGTCTCCTTGAGCTGGCCGCCTTGTCGCGCACGCTCATCATGGACGAGGACGGCGTCTATGATCCGGCCTATTTCA
ACGACCGCATGCTGCTCGGCCTGAAGGGCACGATGAGCGAGGCCGAACTGCACATCCTGAAGTCGCGGCTGCAAGGCGGC
ATTCTCAACAAGGCGCGCCGCGGCGAACTCGAGATGCCGCTGCCGATCGGGTTGGTCTACACCCCTGACGCGCGGGTCGT
GCTCGATCCCGACCGACAGATCCAGGACACGGTGCGGCTCCTGTTCGATACTTTCCGCCAGACCGGCTCGGCCTGCGCCG
TCGTGCGCCGCCTGCGGGGCGAGAAGATCCTCTTTCCGCGGCGTATCCGTCGCGGCATCGGCAAGGGCGACGTCCTGTGG
AACGAGATCGACCATTCCCGCGTGCTCCAGATCTTGCACAACCCGCGCTATGCCGGCGCCTTCGCCTATGGACGCACGCG
CACCGCCTACAATGCCAAGCTGAAGCCCGTGCAACTGCGCGTGGCGAGATCCGACTGGCAGGTACTGATTCCCGACGCCC
ACGACGGCTACATTTCCTGGGCCGAATACGAACGCAATCAGGCAGCCCTGGAACAGAACGCCACCGGTTTTTCACCCGGC
CTGCGTGGACGCATGCCCCGCCAGGGCAGCGGCCTGTTGCAGGGACGGCTGCTGTGCGGCCGCTGCGGTGCACGCATGCG
GGTCCATTACGAGCCGTTCGAGGGGCGGCTGCGCCCATATTACGTCTGCAACGAAGCCGTCGTGCGACACGCCGGCAAAC
ACTGCCAATGGGTGCGCGGTGCTCCGGTCGACGAGGCGGTGAGCGCGCTACTGCTGGAGGTAATGGCGCCGGCAGCGATC
GATGTCGCGCTTGCCGTGCAGCAGGAGATCACCCAGCGCGTGGAGCAGGCCGCGGCGCTGCGCGGCACGCAGCTGCAACG
CGCCCGCTATGAGGCTGAACTGGCCCGCCGGCGCTACCTGAAGGTCGATCCGGACAACCGCCTGGTCGCCGACGCGCTGG
AAGCCGACTGGAACGCACGGCTGCGCGACCTCGACGCACTCCAGCGCGAGCACGAGCGCCAGAACGAGGCCGACCACTCG
CTGCTGGACGAGCCAGCGCAGCAGCGCATCAGGGCGCTGACCGCCGATTTCCCGCGCATCTGGAACGACGAGCGCACCGG
TGCCGTCGAACGCAAGCGCATGCTCGGCCTTCTCATCGAAGACGTGACGCTGCTCGTCGACGATGAGGTCAACATCAACA
TCCGTTGGCGCGGCGGGCGCACGCAGAGCCTGTCGGTGGCCAGACCTCGGCCTATGTCGGTGATACGCAAGACGCCGGCA
CAGGTCGTGGCGTTGATCAACGAGCTGCTGGAGGCCACCAACGACCGGCAGATCGCCGCTCGTCTCAACGAACTCGGGCA
TCGCAACTGGCGCGGCGAACCCTTCACGCCGAAGAAGGTCATGCTCGTGCGCCGCACCTATGGTTTGAAGAGCCGGTACG
AACGGCTGCGCGAGGGCGGCATGCTCACCGGCGAGGAAGTAGCCCAGCAGCTCGGCGTATGCGAATCGACCGTTCACCAA
CTCGGGCGCAAAGGCACTCTCAAGCGTCATCGATACGCCAGCAACCATCGATACTTGTACGAACCGCCGGGCAACGTCAG
ACTCGAAAAAGGCGCCGGCAGTCGATATGGTGGCCGTCAACCCAGATTAATTGTCGCTCAACCACTCCAACAAGGTGCAT
CGTGA

Upstream 100 bases:

>100_bases
CGGCTGGAATCACGGCCTACGGCTTCGGTCGCAGTGCACGATCGCCAGCTCGTGCACATGCTCGCCAACATGGTGCTGGC
AGCAGAGACCCGAGGGAACC

Downstream 100 bases:

>100_bases
TGTCCGCTCCTTGTCGCGCGGCCGGCGCGGTCGCGTCGGAAGAACAGCGCTTCCGTAATGCGCTGCCATGCCGGCATAGG
TGCGATTGACCTGCGGATCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MSTDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPIERVHVIDSDLGLSGAQSQDRDGFQHL
VSEVAMGHAGIVLGLEVSRLARNNADWHRLLELAALSRTLIMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGG
ILNKARRGELEMPLPIGLVYTPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRLRGEKILFPRRIRRGIGKGDVLW
NEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKPVQLRVARSDWQVLIPDAHDGYISWAEYERNQAALEQNATGFSPG
LRGRMPRQGSGLLQGRLLCGRCGARMRVHYEPFEGRLRPYYVCNEAVVRHAGKHCQWVRGAPVDEAVSALLLEVMAPAAI
DVALAVQQEITQRVEQAAALRGTQLQRARYEAELARRRYLKVDPDNRLVADALEADWNARLRDLDALQREHERQNEADHS
LLDEPAQQRIRALTADFPRIWNDERTGAVERKRMLGLLIEDVTLLVDDEVNINIRWRGGRTQSLSVARPRPMSVIRKTPA
QVVALINELLEATNDRQIAARLNELGHRNWRGEPFTPKKVMLVRRTYGLKSRYERLREGGMLTGEEVAQQLGVCESTVHQ
LGRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPRLIVAQPLQQGAS

Sequences:

>Translated_694_residues
MSTDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPIERVHVIDSDLGLSGAQSQDRDGFQHL
VSEVAMGHAGIVLGLEVSRLARNNADWHRLLELAALSRTLIMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGG
ILNKARRGELEMPLPIGLVYTPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRLRGEKILFPRRIRRGIGKGDVLW
NEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKPVQLRVARSDWQVLIPDAHDGYISWAEYERNQAALEQNATGFSPG
LRGRMPRQGSGLLQGRLLCGRCGARMRVHYEPFEGRLRPYYVCNEAVVRHAGKHCQWVRGAPVDEAVSALLLEVMAPAAI
DVALAVQQEITQRVEQAAALRGTQLQRARYEAELARRRYLKVDPDNRLVADALEADWNARLRDLDALQREHERQNEADHS
LLDEPAQQRIRALTADFPRIWNDERTGAVERKRMLGLLIEDVTLLVDDEVNINIRWRGGRTQSLSVARPRPMSVIRKTPA
QVVALINELLEATNDRQIAARLNELGHRNWRGEPFTPKKVMLVRRTYGLKSRYERLREGGMLTGEEVAQQLGVCESTVHQ
LGRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPRLIVAQPLQQGAS
>Mature_693_residues
STDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPIERVHVIDSDLGLSGAQSQDRDGFQHLV
SEVAMGHAGIVLGLEVSRLARNNADWHRLLELAALSRTLIMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGGI
LNKARRGELEMPLPIGLVYTPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRLRGEKILFPRRIRRGIGKGDVLWN
EIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKPVQLRVARSDWQVLIPDAHDGYISWAEYERNQAALEQNATGFSPGL
RGRMPRQGSGLLQGRLLCGRCGARMRVHYEPFEGRLRPYYVCNEAVVRHAGKHCQWVRGAPVDEAVSALLLEVMAPAAID
VALAVQQEITQRVEQAAALRGTQLQRARYEAELARRRYLKVDPDNRLVADALEADWNARLRDLDALQREHERQNEADHSL
LDEPAQQRIRALTADFPRIWNDERTGAVERKRMLGLLIEDVTLLVDDEVNINIRWRGGRTQSLSVARPRPMSVIRKTPAQ
VVALINELLEATNDRQIAARLNELGHRNWRGEPFTPKKVMLVRRTYGLKSRYERLREGGMLTGEEVAQQLGVCESTVHQL
GRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPRLIVAQPLQQGAS

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4BA_RHISN (P55368)

Other databases:

- EMBL:   U00090
- EMBL:   U00090
- RefSeq:   NP_443779.1
- RefSeq:   NP_444021.1
- RefSeq:   YP_002822313.1
- RefSeq:   YP_002822373.1
- RefSeq:   YP_002823138.1
- RefSeq:   YP_002823201.1
- RefSeq:   YP_002823713.1
- RefSeq:   YP_002823883.1
- RefSeq:   YP_002826119.1
- RefSeq:   YP_002826760.1
- ProteinModelPortal:   P55368
- SMR:   P55368
- GeneID:   7788057
- GeneID:   7788668
- GeneID:   7788734
- GeneID:   7789002
- GeneID:   7789629
- GeneID:   7789692
- GeneID:   7791523
- GeneID:   7793472
- GeneID:   962392
- GeneID:   962634
- GenomeReviews:   U00090_GR
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00280
- KEGG:   rhi:NGR_a02040
- HOGENOM:   HBG481520
- ProtClustDB:   CLSK864427
- InterPro:   IPR011109
- InterPro:   IPR006119
- Gene3D:   G3DSA:3.40.50.1390
- SMART:   SM00857

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase; SSF53041 Resolv_N

EC number: NA

Molecular weight: Translated: 78744; Mature: 78613

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xad18f80)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPIERVHVI
CCCCEEEEECHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEECCCCEEEEEE
DSDLGLSGAQSQDRDGFQHLVSEVAMGHAGIVLGLEVSRLARNNADWHRLLELAALSRTL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHE
IMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGGILNKARRGELEMPLPIGLVY
EECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHCHHCCCCCCCCCCEEEEE
TPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRLRGEKILFPRRIRRGIGKGDVLW
CCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHH
NEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKPVQLRVARSDWQVLIPDAHDGYISW
HHCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEH
AEYERNQAALEQNATGFSPGLRGRMPRQGSGLLQGRLLCGRCGARMRVHYEPFEGRLRPY
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCE
YVCNEAVVRHAGKHCQWVRGAPVDEAVSALLLEVMAPAAIDVALAVQQEITQRVEQAAAL
EEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RGTQLQRARYEAELARRRYLKVDPDNRLVADALEADWNARLRDLDALQREHERQNEADHS
CCHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHH
LLDEPAQQRIRALTADFPRIWNDERTGAVERKRMLGLLIEDVTLLVDDEVNINIRWRGGR
HHCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHEEEEEECCEEEEEEECCCC
TQSLSVARPRPMSVIRKTPAQVVALINELLEATNDRQIAARLNELGHRNWRGEPFTPKKV
CCCEECCCCCCHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHH
MLVRRTYGLKSRYERLREGGMLTGEEVAQQLGVCESTVHQLGRKGTLKRHRYASNHRYLY
EEEHHHHCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCEEE
EPPGNVRLEKGAGSRYGGRQPRLIVAQPLQQGAS
CCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCH
>Mature Secondary Structure 
STDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPIERVHVI
CCCEEEEECHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEECCCCEEEEEE
DSDLGLSGAQSQDRDGFQHLVSEVAMGHAGIVLGLEVSRLARNNADWHRLLELAALSRTL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHE
IMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGGILNKARRGELEMPLPIGLVY
EECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHCHHCCCCCCCCCCEEEEE
TPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRLRGEKILFPRRIRRGIGKGDVLW
CCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHH
NEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKPVQLRVARSDWQVLIPDAHDGYISW
HHCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEH
AEYERNQAALEQNATGFSPGLRGRMPRQGSGLLQGRLLCGRCGARMRVHYEPFEGRLRPY
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCE
YVCNEAVVRHAGKHCQWVRGAPVDEAVSALLLEVMAPAAIDVALAVQQEITQRVEQAAAL
EEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RGTQLQRARYEAELARRRYLKVDPDNRLVADALEADWNARLRDLDALQREHERQNEADHS
CCHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHH
LLDEPAQQRIRALTADFPRIWNDERTGAVERKRMLGLLIEDVTLLVDDEVNINIRWRGGR
HHCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHEEEEEECCEEEEEEECCCC
TQSLSVARPRPMSVIRKTPAQVVALINELLEATNDRQIAARLNELGHRNWRGEPFTPKKV
CCCEECCCCCCHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHH
MLVRRTYGLKSRYERLREGGMLTGEEVAQQLGVCESTVHQLGRKGTLKRHRYASNHRYLY
EEEHHHHCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCEEE
EPPGNVRLEKGAGSRYGGRQPRLIVAQPLQQGAS
CCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424