Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519902

GI number: 16519902

Start: 266788

End: 267054

Strand: Direct

Name: Not Available

Synonym: NGR_a02030

Alternate gene names: NA

Gene position: 266788-267054 (Clockwise)

Preceding gene: 16519903

Following gene: 16519659

Centisome position: 49.76

GC content: 65.17

Gene sequence:

>267_bases
GTGCTACCGCGCAGCTGCAAGGATTTCTACGAGACGCTGCGCACCGCCGTCCTTTGCGGTCAGGCCTGCGCCAAGGACAT
GGGCGCCATCGTTTTCCACGGCCTTTGGCAAGGGCTGGCGGTGCTGATCGCGCAGCCTCCCCCGCCGACGCATCGGCGGC
TGGAATCACGGCCTACGGCTTCGGTCGCAGTGCACGATCGCCAGCTCGTGCACATGCTCGCCAACATGGTGCTGGCAGCA
GAGACCCGAGGGAACCATGTCTACTGA

Upstream 100 bases:

>100_bases
GAACTGCTGCATTCGACGCTCGGCATCAGTGTCCATCCCCGCAGCATCGAACGCGCGATCGCCCGTAAAAAAAAACGGTG
AGCCCCATGCACGCACCCCG

Downstream 100 bases:

>100_bases
CATCGCCATAAAGGTTGACGCCGACCATCTGCGGCGTGATGCATTCCTCTACGTGCGTCAGTCCTCGCTTCGTCAGGTGT
TCGAGAACACCGAGAGCACC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLPRSCKDFYETLRTAVLCGQACAKDMGAIVFHGLWQGLAVLIAQPPPPTHRRLESRPTASVAVHDRQLVHMLANMVLAA
ETRGNHVY

Sequences:

>Translated_88_residues
MLPRSCKDFYETLRTAVLCGQACAKDMGAIVFHGLWQGLAVLIAQPPPPTHRRLESRPTASVAVHDRQLVHMLANMVLAA
ETRGNHVY
>Mature_88_residues
MLPRSCKDFYETLRTAVLCGQACAKDMGAIVFHGLWQGLAVLIAQPPPPTHRRLESRPTASVAVHDRQLVHMLANMVLAA
ETRGNHVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Rhizobium NGR234A y4oL

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4BB_RHISN (P55369)

Other databases:

- EMBL:   U00090
- EMBL:   U00090
- RefSeq:   NP_443780.1
- RefSeq:   NP_444022.1
- GeneID:   962567
- GeneID:   962635
- GenomeReviews:   U00090_GR
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00270
- KEGG:   rhi:NGR_a02030
- HOGENOM:   HBG655903
- ProtClustDB:   CLSK514299

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9736; Mature: 9736

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPRSCKDFYETLRTAVLCGQACAKDMGAIVFHGLWQGLAVLIAQPPPPTHRRLESRPTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
SVAVHDRQLVHMLANMVLAAETRGNHVY
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLPRSCKDFYETLRTAVLCGQACAKDMGAIVFHGLWQGLAVLIAQPPPPTHRRLESRPTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
SVAVHDRQLVHMLANMVLAAETRGNHVY
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424