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Identifier: 16519655

GI number: 16519655

Start: 40340

End: 40771

Strand: Reverse

Name: Not Available

Synonym: NGR_a00320

Alternate gene names: 16519655

Gene position: 40771-40340 (Counterclockwise)

Preceding gene: 16519654

Following gene: 16519657

Centisome position: 7.6

GC content: 60.42

Gene sequence:

>432_bases
ATGACAGAAACCACGCTCGGTGCGAGCAACGAACTTTTGGCAGAACTGACGGCAGAAATCGTAGCCGCCTATGTCAGCAC
CCACGTGGTTCCGGGTGCCGAGCTTCCGACGCTTATCGCTGACGTTCATTCAGCGCTCAACAATGCCACTGCTCCCGCGC
CGGTGATTGCTCCCATTGAGAAGCCGAAGCCAGCGGTCTCGATCCGCAAGTCTGTGCAGGACGATCAGATCACCTGCCTC
GAATGCGGCGGCGCCTTCAAGTCGCTGAAGCGCCACTTGATGACCCACCACAATCTGTCGCCGGAAGATTATCGCGAAAA
GTGGGACCTACCCGCGGACTACCCGATGGTCGCGCCCGCTTATGCGGAAGCCCGCTCGCGTCTGGCCAAGGAGATAGGCC
TCGGCGAGCGCCGCAAGCGTCGTGGTAAGTAG

Upstream 100 bases:

>100_bases
CCAGTTTCAAGAGGCAAGTGAGTTCAGCGGCATTTTCTCGCACGTTTCCTCCTGAAACGTCGTTTTGGGATATGTTGCTA
AGATCCGATAGGAGAAGAAG

Downstream 100 bases:

>100_bases
AACGTTATCGCCGGCGGCGATCGCTGCCAGCTACGCGCCACGCCTTTAATTTGCGCGAAATGCTATGCAGAATGCGGTGT
TTCGGCCGCACCTTCCAGAT

Product: transcriptional regulator, Roc/MucR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTETTLGASNELLAELTAEIVAAYVSTHVVPGAELPTLIADVHSALNNATAPAPVIAPIEKPKPAVSIRKSVQDDQITCL
ECGGAFKSLKRHLMTHHNLSPEDYREKWDLPADYPMVAPAYAEARSRLAKEIGLGERRKRRGK

Sequences:

>Translated_143_residues
MTETTLGASNELLAELTAEIVAAYVSTHVVPGAELPTLIADVHSALNNATAPAPVIAPIEKPKPAVSIRKSVQDDQITCL
ECGGAFKSLKRHLMTHHNLSPEDYREKWDLPADYPMVAPAYAEARSRLAKEIGLGERRKRRGK
>Mature_142_residues
TETTLGASNELLAELTAEIVAAYVSTHVVPGAELPTLIADVHSALNNATAPAPVIAPIEKPKPAVSIRKSVQDDQITCLE
CGGAFKSLKRHLMTHHNLSPEDYREKWDLPADYPMVAPAYAEARSRLAKEIGLGERRKRRGK

Specific function: Could be involved in the regulation of exopolysaccharide synthesis

COG id: COG4957

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ros/mucR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MUCR_RHISN (P55363)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443775.1
- ProteinModelPortal:   P55363
- SMR:   P55363
- GeneID:   962604
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00320
- HOGENOM:   HBG457627
- ProtClustDB:   CLSK800246
- GO:   GO:0006350
- InterPro:   IPR008807

Pfam domain/function: PF05443 ROS_MUCR

EC number: NA

Molecular weight: Translated: 15566; Mature: 15435

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTLGASNELLAELTAEIVAAYVSTHVVPGAELPTLIADVHSALNNATAPAPVIAPIE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCC
KPKPAVSIRKSVQDDQITCLECGGAFKSLKRHLMTHHNLSPEDYREKWDLPADYPMVAPA
CCCHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHH
YAEARSRLAKEIGLGERRKRRGK
HHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
TETTLGASNELLAELTAEIVAAYVSTHVVPGAELPTLIADVHSALNNATAPAPVIAPIE
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCC
KPKPAVSIRKSVQDDQITCLECGGAFKSLKRHLMTHHNLSPEDYREKWDLPADYPMVAPA
CCCHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHH
YAEARSRLAKEIGLGERRKRRGK
HHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424