Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519654

GI number: 16519654

Start: 41289

End: 41867

Strand: Reverse

Name: Not Available

Synonym: NGR_a00330

Alternate gene names: NA

Gene position: 41867-41289 (Counterclockwise)

Preceding gene: 16519653

Following gene: 16519655

Centisome position: 7.81

GC content: 53.2

Gene sequence:

>579_bases
GTGGCGCGTTTTGGCGCTGATGAGTCGTGGATTGCTTGCGAGATACATATGAAAACACCACCACGGAGGTTTATTGTCGA
ATTCAAGCAAGCACGGCGGCGATCAAAGGAACGAACGAATTCAGTCTGGGGAAACACGGACCTTAAGGCTTTGACCCGCG
AAGTGGAAGAGATGGCTCCGCATTTGTTCAACTTAACGGAAGAGCCAGTATCCCCTAACGTAGCCTACGGTCCGCCGGCC
AGCCCGAATGCAGAGTTTCTCATTGCAGACAAAGAGAATATCGGGCTTGGGCCAGAAGCCGTGACACCGGCCGAAGGTTC
GGAAAACGCGTTCTCGGGGCTGTTGCAGGAGACGCCACCGGTCTCCCACACCCGAACAAACTCCAAACAGCGCATTTCGC
GAAAGCTACCCGAGCGGTTGTCATTGGACGTGCGTGAGAATGTAGAACGCCCGATTTCTCGCGGTGAATTGGCCACTCTC
GAAGCAGAAAACAAGCGCCTCAAAAGGCTGCTCGCTGAACGGATCCTTACCCAAAACTTGCAACTCAAGAAGATGCTTGA
TCGGTTTAACCTCAATTGA

Upstream 100 bases:

>100_bases
GGCGCCCTGCCGGCTTCCGAAAGGGACGGCGTGCCTAGCCTTACGGCCACTTGCATCGAGTCCGAAATGGCGGTATTTGG
CCGAATGGTAAAGGAATGTC

Downstream 100 bases:

>100_bases
CGATGTCGCATCCGCGCGAAAGTCTTAGGAATCTCTTGGGGGCCGGCGTTTTAGCAATCGCTGATAGCTCTTCAATCCCA
CCTCAATGACACAGTTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MARFGADESWIACEIHMKTPPRRFIVEFKQARRRSKERTNSVWGNTDLKALTREVEEMAPHLFNLTEEPVSPNVAYGPPA
SPNAEFLIADKENIGLGPEAVTPAEGSENAFSGLLQETPPVSHTRTNSKQRISRKLPERLSLDVRENVERPISRGELATL
EAENKRLKRLLAERILTQNLQLKKMLDRFNLN

Sequences:

>Translated_192_residues
MARFGADESWIACEIHMKTPPRRFIVEFKQARRRSKERTNSVWGNTDLKALTREVEEMAPHLFNLTEEPVSPNVAYGPPA
SPNAEFLIADKENIGLGPEAVTPAEGSENAFSGLLQETPPVSHTRTNSKQRISRKLPERLSLDVRENVERPISRGELATL
EAENKRLKRLLAERILTQNLQLKKMLDRFNLN
>Mature_191_residues
ARFGADESWIACEIHMKTPPRRFIVEFKQARRRSKERTNSVWGNTDLKALTREVEEMAPHLFNLTEEPVSPNVAYGPPAS
PNAEFLIADKENIGLGPEAVTPAEGSENAFSGLLQETPPVSHTRTNSKQRISRKLPERLSLDVRENVERPISRGELATLE
AENKRLKRLLAERILTQNLQLKKMLDRFNLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti RA0936 and y4nF

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4AO_RHISN (P55362)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443774.1
- GeneID:   962331
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00330
- HOGENOM:   HBG653942

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21825; Mature: 21694

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFGADESWIACEIHMKTPPRRFIVEFKQARRRSKERTNSVWGNTDLKALTREVEEMAP
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
HLFNLTEEPVSPNVAYGPPASPNAEFLIADKENIGLGPEAVTPAEGSENAFSGLLQETPP
HHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
VSHTRTNSKQRISRKLPERLSLDVRENVERPISRGELATLEAENKRLKRLLAERILTQNL
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCH
QLKKMLDRFNLN
HHHHHHHHHCCC
>Mature Secondary Structure 
ARFGADESWIACEIHMKTPPRRFIVEFKQARRRSKERTNSVWGNTDLKALTREVEEMAP
CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
HLFNLTEEPVSPNVAYGPPASPNAEFLIADKENIGLGPEAVTPAEGSENAFSGLLQETPP
HHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
VSHTRTNSKQRISRKLPERLSLDVRENVERPISRGELATLEAENKRLKRLLAERILTQNL
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCH
QLKKMLDRFNLN
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424