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Identifier: 16519653

GI number: 16519653

Start: 41998

End: 42444

Strand: Reverse

Name: Not Available

Synonym: NGR_a00340

Alternate gene names: 16519653

Gene position: 42444-41998 (Counterclockwise)

Preceding gene: 16519652

Following gene: 16519654

Centisome position: 7.92

GC content: 54.14

Gene sequence:

>447_bases
GTGGCTGACGAGAGTAACACAGGACCAGTTGCCGCGGCTGAGGCGGTTGCCGAAACGCAAGCACCAGCTGGCAAAAGGAA
GAGTTCGTCGCGGCGTCAAAGAACGGCTGCCGGACAAGTTGCGGAATCAAAGACGACTGCTAAGCCTAAGAGATATAGCG
AGACAGAAAGAGCTGACAAGCTCAATCTGATCGAGGCCGAAGTGGCTCAAGGCAATAGCACCCTAAAGGACGCGATCAAG
AGCGCCGGCATATCGGAGCAAACCTACTACGTGTGGAAGAAATCTGCTAAGCCTGCCGATCGAAAACCAGAGGAGTCTGT
GGTGGCCGGCGATGACCTTGCCGATCTCATTCAACTCGATAAGGAAAACTTGAGGCTTCGCAACCTTTTGTCGGACAAAC
TGCGTGCGGAAAACGCCGAACTGCGCAAGAGACTTGGGCTGGATTAG

Upstream 100 bases:

>100_bases
AATGAAATCAACCGTAAGTGACATCGCCATGGGACGCTTGCATTGACTCTGTAGCTCATTGAGTTCAAATCATACAAGTG
AGCTAGGGGAGGAAATCACA

Downstream 100 bases:

>100_bases
TTCAAGAGTAGCCTCTCAAGGCTGTGGTAAGGCGCCCTGCCGGCTTCCGAAAGGGACGGCGTGCCTAGCCTTACGGCCAC
TTGCATCGAGTCCGAAATGG

Product: SyrB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MADESNTGPVAAAEAVAETQAPAGKRKSSSRRQRTAAGQVAESKTTAKPKRYSETERADKLNLIEAEVAQGNSTLKDAIK
SAGISEQTYYVWKKSAKPADRKPEESVVAGDDLADLIQLDKENLRLRNLLSDKLRAENAELRKRLGLD

Sequences:

>Translated_148_residues
MADESNTGPVAAAEAVAETQAPAGKRKSSSRRQRTAAGQVAESKTTAKPKRYSETERADKLNLIEAEVAQGNSTLKDAIK
SAGISEQTYYVWKKSAKPADRKPEESVVAGDDLADLIQLDKENLRLRNLLSDKLRAENAELRKRLGLD
>Mature_147_residues
ADESNTGPVAAAEAVAETQAPAGKRKSSSRRQRTAAGQVAESKTTAKPKRYSETERADKLNLIEAEVAQGNSTLKDAIKS
AGISEQTYYVWKKSAKPADRKPEESVVAGDDLADLIQLDKENLRLRNLLSDKLRAENAELRKRLGLD

Specific function: Responsible for the repression of syrM activity

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the syrB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYRB_RHISN (P55361)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443773.1
- GeneID:   962256
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00340
- HOGENOM:   HBG365670
- ProtClustDB:   CLSK891907
- GO:   GO:0009877
- GO:   GO:0006350

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16138; Mature: 16007

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADESNTGPVAAAEAVAETQAPAGKRKSSSRRQRTAAGQVAESKTTAKPKRYSETERADK
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LNLIEAEVAQGNSTLKDAIKSAGISEQTYYVWKKSAKPADRKPEESVVAGDDLADLIQLD
HHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEECCCHHHHHHHHC
KENLRLRNLLSDKLRAENAELRKRLGLD
HHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
ADESNTGPVAAAEAVAETQAPAGKRKSSSRRQRTAAGQVAESKTTAKPKRYSETERADK
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LNLIEAEVAQGNSTLKDAIKSAGISEQTYYVWKKSAKPADRKPEESVVAGDDLADLIQLD
HHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEECCCHHHHHHHHC
KENLRLRNLLSDKLRAENAELRKRLGLD
HHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424