Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519650
GI number: 16519650
Start: 44655
End: 44807
Strand: Reverse
Name: Not Available
Synonym: NGR_a00370
Alternate gene names: NA
Gene position: 44807-44655 (Counterclockwise)
Preceding gene: 16519649
Following gene: 16519651
Centisome position: 8.36
GC content: 60.13
Gene sequence:
>153_bases TTGTTAGTGGCAAGGCTGTTGCGGTGGGCGTTGACGGTTTCGCTCCGGCTCGATCCCTACGGTCGAAAAGACGAAATGGC AGGAGCGGTCGGCCGTTTTGCCACAAAGCCTGTTCTTCAGGAGGCGCATGCAAGAGGGCGGGCGACGGCATGA
Upstream 100 bases:
>100_bases TTTACCGACAGATCAGCTATGCGCTTGAAGCGCTGCTTGCCGTCCCGTCTGGCGGAAGGCCCGCGAGGAACGGCGAAAAG GCGGCGCCGAAGCCCCTGCA
Downstream 100 bases:
>100_bases AGCCGTGAATGCACTTGACTTCAGATTAATTAAGCGTTTTCTAACGATTTGCATAATTGATCGTTCGGATGACAACCATC CGCACTGTGGATTCGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MLVARLLRWALTVSLRLDPYGRKDEMAGAVGRFATKPVLQEAHARGRATA
Sequences:
>Translated_50_residues MLVARLLRWALTVSLRLDPYGRKDEMAGAVGRFATKPVLQEAHARGRATA >Mature_50_residues MLVARLLRWALTVSLRLDPYGRKDEMAGAVGRFATKPVLQEAHARGRATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4AK_RHISN (P55358)
Other databases:
- EMBL: U00090 - RefSeq: NP_443770.1 - GeneID: 962347 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a00370
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5522; Mature: 5522
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVARLLRWALTVSLRLDPYGRKDEMAGAVGRFATKPVLQEAHARGRATA CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLVARLLRWALTVSLRLDPYGRKDEMAGAVGRFATKPVLQEAHARGRATA CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424