Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668842
Identifier: 15668842
GI number: 15668842
Start: 586492
End: 587040
Strand: Reverse
Name: 15668842
Synonym: MJ0661
Alternate gene names: NA
Gene position: 587040-586492 (Counterclockwise)
Preceding gene: 15668843
Following gene: 15668841
Centisome position: 35.26
GC content: 29.87
Gene sequence:
>549_bases GTGGAAAGTGTAAGGAGAGGGAAACTCATGAAAAATAAGAAAATAAAATTTGATGTCTATTTGAATGGAATAGCTTATCA TTGTATAAAATGCGGATTCTGCTGTGATGCTCCAACTGTTACAAAAAAGGACTTGGCTAAAATAGCTGGTTATCTAAAAA TACCATTTGATGAGGTTTTAAAGCGATATGTTAGATTTTTTAATGGATATATTGGTGAGCTTAAAGAAGTTGGAGGAAAA TGCATATTTTTAGATAAAAAAACCAAAAAATGTAAAATTTATAAAGTTAGGCCTTTAATTTGTAGGTTAAGACCTTACTC AGTCCAAGTTAGAAATGGAAAATTAACTTTAACCTATGATATATGGTTTTTAAGGTATTGTAGAGGGCTTTATTTGGGAG ATGGTAAAGTTGAGGATGAATACTTTAAATATGCTGAACTTGTTTTAAAATACTTAGGATTTGAGGAGGGTGTTGATGAA GAAGAGTTTAAAAGGGCTAAAGAGAGGTTATTGGAAGAATCTTTAAAGTATAGAAAAAAGAAAGATTAA
Upstream 100 bases:
>100_bases TTATATGGTTATATTATATATAAATTCCCTAAAACCATTCATATAAAAATTAGTAAAGCACTTGATTTTTTAGCTGGACA TATAAAACCATGTATTTTAT
Downstream 100 bases:
>100_bases ACCTTTTTATTTATAGTTGTGTAAAAATATAAAAATATTTGCACATCCATAAGTATTTATACCCCTTTTGACAAGGTTGT TATTGAGCGAAATGCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MESVRRGKLMKNKKIKFDVYLNGIAYHCIKCGFCCDAPTVTKKDLAKIAGYLKIPFDEVLKRYVRFFNGYIGELKEVGGK CIFLDKKTKKCKIYKVRPLICRLRPYSVQVRNGKLTLTYDIWFLRYCRGLYLGDGKVEDEYFKYAELVLKYLGFEEGVDE EEFKRAKERLLEESLKYRKKKD
Sequences:
>Translated_182_residues MESVRRGKLMKNKKIKFDVYLNGIAYHCIKCGFCCDAPTVTKKDLAKIAGYLKIPFDEVLKRYVRFFNGYIGELKEVGGK CIFLDKKTKKCKIYKVRPLICRLRPYSVQVRNGKLTLTYDIWFLRYCRGLYLGDGKVEDEYFKYAELVLKYLGFEEGVDE EEFKRAKERLLEESLKYRKKKD >Mature_182_residues MESVRRGKLMKNKKIKFDVYLNGIAYHCIKCGFCCDAPTVTKKDLAKIAGYLKIPFDEVLKRYVRFFNGYIGELKEVGGK CIFLDKKTKKCKIYKVRPLICRLRPYSVQVRNGKLTLTYDIWFLRYCRGLYLGDGKVEDEYFKYAELVLKYLGFEEGVDE EEFKRAKERLLEESLKYRKKKD
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To H.pylori HP0274
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y661_METJA (Q58075)
Other databases:
- EMBL: L77117 - PIR: E64382 - RefSeq: NP_247645.1 - GeneID: 1451527 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0661 - NMPDR: fig|243232.1.peg.682 - TIGR: MJ0661 - HOGENOM: HBG539099 - OMA: LICRLRP - ProtClustDB: CLSK876282 - BioCyc: MJAN243232:MJ_0661-MONOMER - InterPro: IPR005358
Pfam domain/function: PF03692 UPF0153
EC number: NA
Molecular weight: Translated: 21570; Mature: 21570
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVRRGKLMKNKKIKFDVYLNGIAYHCIKCGFCCDAPTVTKKDLAKIAGYLKIPFDEVL CCCCHHCCHHCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHH KRYVRFFNGYIGELKEVGGKCIFLDKKTKKCKIYKVRPLICRLRPYSVQVRNGKLTLTYD HHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECHHHEECCCCEEEEECCEEEEEEH IWFLRYCRGLYLGDGKVEDEYFKYAELVLKYLGFEEGVDEEEFKRAKERLLEESLKYRKK HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC KD CC >Mature Secondary Structure MESVRRGKLMKNKKIKFDVYLNGIAYHCIKCGFCCDAPTVTKKDLAKIAGYLKIPFDEVL CCCCHHCCHHCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHH KRYVRFFNGYIGELKEVGGKCIFLDKKTKKCKIYKVRPLICRLRPYSVQVRNGKLTLTYD HHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECHHHEECCCCEEEEECCEEEEEEH IWFLRYCRGLYLGDGKVEDEYFKYAELVLKYLGFEEGVDEEEFKRAKERLLEESLKYRKK HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC KD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087