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The map label for this gene is 15668841

Identifier: 15668841

GI number: 15668841

Start: 586132

End: 586365

Strand: Reverse

Name: 15668841

Synonym: MJ0660

Alternate gene names: NA

Gene position: 586365-586132 (Counterclockwise)

Preceding gene: 15668842

Following gene: 15668835

Centisome position: 35.22

GC content: 33.33

Gene sequence:

>234_bases
ATGTTTAATAATAAAGGAAGAAGAAATGTAAGAAATAATGAAGTTAGAAGAAATGTTCCAGTTAAAGAAGGCGAAACCTA
CACTGTTACAATTGAAGATATGGGTAGAGGCGGAGACGGAATAGCAAGAGTTGAAGGATTCGTTGTCTTCGTCCCTGAAA
CACAAAAAGGAGAAACAGTCAATGTAAAAATAACTGCTGTAAAAAGTAAGTTTGCATTTGCAGAAAAAATTTAA

Upstream 100 bases:

>100_bases
ATATAAAAATATTTGCACATCCATAAGTATTTATACCCCTTTTGACAAGGTTGTTATTGAGCGAAATGCGATGAATCCTT
AAATAAATTTGGTGAATTGA

Downstream 100 bases:

>100_bases
AATCTCTTTAAGGTTTAGCTAAACCTTTCAATACTTTTTTCATTTTGAGAAACAATTTAAAGATTAACAAAATTAATTAT
TAATTAGAGTTTATTTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MFNNKGRRNVRNNEVRRNVPVKEGETYTVTIEDMGRGGDGIARVEGFVVFVPETQKGETVNVKITAVKSKFAFAEKI

Sequences:

>Translated_77_residues
MFNNKGRRNVRNNEVRRNVPVKEGETYTVTIEDMGRGGDGIARVEGFVVFVPETQKGETVNVKITAVKSKFAFAEKI
>Mature_77_residues
MFNNKGRRNVRNNEVRRNVPVKEGETYTVTIEDMGRGGDGIARVEGFVVFVPETQKGETVNVKITAVKSKFAFAEKI

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y660_METJA (Q58074)

Other databases:

- EMBL:   L77117
- PIR:   D64382
- RefSeq:   NP_247644.1
- ProteinModelPortal:   Q58074
- SMR:   Q58074
- GeneID:   1451526
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0660
- NMPDR:   fig|243232.1.peg.681
- TIGR:   MJ0660
- HOGENOM:   HBG555108
- OMA:   TIEDMGR
- ProtClustDB:   CLSK796509
- BioCyc:   MJAN243232:MJ_0660-MONOMER
- InterPro:   IPR016027
- InterPro:   IPR002792

Pfam domain/function: PF01938 TRAM; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8631; Mature: 8631

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNNKGRRNVRNNEVRRNVPVKEGETYTVTIEDMGRGGDGIARVEGFVVFVPETQKGETV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECEEEEECCCCCCCCEE
NVKITAVKSKFAFAEKI
EEEEEEEECCEEEECCC
>Mature Secondary Structure
MFNNKGRRNVRNNEVRRNVPVKEGETYTVTIEDMGRGGDGIARVEGFVVFVPETQKGETV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECEEEEECCCCCCCCEE
NVKITAVKSKFAFAEKI
EEEEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087