Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668827
Identifier: 15668827
GI number: 15668827
Start: 574756
End: 575250
Strand: Direct
Name: 15668827
Synonym: MJ0646
Alternate gene names: NA
Gene position: 574756-575250 (Clockwise)
Preceding gene: 15668826
Following gene: 15668830
Centisome position: 34.52
GC content: 27.47
Gene sequence:
>495_bases ATGAAAGCAAGGGAATTATTTGAAAAATTAAAAAAAGAGCTTAATAATTTTAGCATATACGATATAATGATGATTAGAAG TTTTATTGAAAAAGATGCTAAATATCTCCCTCCACAATACAAAAACCATTATGTTGAGGCGATGATGAAGTATTTAATTG AAACATTTAACGAGATTAGAAAAAAAAGCGTTGATGAGATTCAAGATGAAGAAATTGATGAAGAAAAATTAAATGAGATG CTCAATAGAATTGAAAGGTTTAGGAAATATTATACACCAGATGAAGAGAGATTTATAAACCTTTCAAAAATTCTCTGCCC ATACTTGGCATTTATTGCTAAAAAGCCATTGCATCCAGAATATTTAACATTTCCTGGAAATGTAAAAATCATTAAAAAAG GCAATAACTATTATTGCCCAGTAAAAAATAAACAGCTTAATGAATATTCCTTGTGCGAGTTTTGTGTTTGTAAGAGTATA GATGAATTAAAATAA
Upstream 100 bases:
>100_bases AAGGAAAATGTAATAATTTCAGGAATAAAGATGGTTGCTGGAGCTTTAGCTGTGGCAATTTTATGCTTTATGATAGAGAA AGCATTCTAATTGTGAGATT
Downstream 100 bases:
>100_bases ATAATAAAAAATAAAAAAATAATATAATATAATTAAGTTAATTAAGCTTCTTTTTCGTTAATTTTACTTTTTAAGTAATT TATTGCCTCTTCCTTAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKARELFEKLKKELNNFSIYDIMMIRSFIEKDAKYLPPQYKNHYVEAMMKYLIETFNEIRKKSVDEIQDEEIDEEKLNEM LNRIERFRKYYTPDEERFINLSKILCPYLAFIAKKPLHPEYLTFPGNVKIIKKGNNYYCPVKNKQLNEYSLCEFCVCKSI DELK
Sequences:
>Translated_164_residues MKARELFEKLKKELNNFSIYDIMMIRSFIEKDAKYLPPQYKNHYVEAMMKYLIETFNEIRKKSVDEIQDEEIDEEKLNEM LNRIERFRKYYTPDEERFINLSKILCPYLAFIAKKPLHPEYLTFPGNVKIIKKGNNYYCPVKNKQLNEYSLCEFCVCKSI DELK >Mature_164_residues MKARELFEKLKKELNNFSIYDIMMIRSFIEKDAKYLPPQYKNHYVEAMMKYLIETFNEIRKKSVDEIQDEEIDEEKLNEM LNRIERFRKYYTPDEERFINLSKILCPYLAFIAKKPLHPEYLTFPGNVKIIKKGNNYYCPVKNKQLNEYSLCEFCVCKSI DELK
Specific function: Unknown
COG id: COG4066
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0305 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y646_METJA (Q58062)
Other databases:
- EMBL: L77117 - PIR: F64380 - RefSeq: NP_247630.1 - ProteinModelPortal: Q58062 - GeneID: 1451512 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0646 - NMPDR: fig|243232.1.peg.667 - TIGR: MJ0646 - HOGENOM: HBG540949 - OMA: CEFCICK - ProtClustDB: PRK01022 - BioCyc: MJAN243232:MJ_0646-MONOMER - HAMAP: MF_00763 - InterPro: IPR019215 - InterPro: IPR009182 - PIRSF: PIRSF004959
Pfam domain/function: PF09888 DUF2115
EC number: NA
Molecular weight: Translated: 19895; Mature: 19895
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARELFEKLKKELNNFSIYDIMMIRSFIEKDAKYLPPQYKNHYVEAMMKYLIETFNEIR CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KKSVDEIQDEEIDEEKLNEMLNRIERFRKYYTPDEERFINLSKILCPYLAFIAKKPLHPE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC YLTFPGNVKIIKKGNNYYCPVKNKQLNEYSLCEFCVCKSIDELK EEECCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKARELFEKLKKELNNFSIYDIMMIRSFIEKDAKYLPPQYKNHYVEAMMKYLIETFNEIR CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KKSVDEIQDEEIDEEKLNEMLNRIERFRKYYTPDEERFINLSKILCPYLAFIAKKPLHPE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC YLTFPGNVKIIKKGNNYYCPVKNKQLNEYSLCEFCVCKSIDELK EEECCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087