Click here to switch to the map view.

The map label for this gene is rraA [C]

Identifier: 15668825

GI number: 15668825

Start: 573514

End: 574140

Strand: Direct

Name: rraA [C]

Synonym: MJ0644

Alternate gene names: 15668825

Gene position: 573514-574140 (Clockwise)

Preceding gene: 15668824

Following gene: 15668826

Centisome position: 34.45

GC content: 33.49

Gene sequence:

>627_bases
GTGAAAGTCCTATTAAAAATTATTGTAGGGAGGGCTATGAATATCTTAAAAAATTTTTCAGTTCCCAATTTATGTGATGC
TGGAGCTAAGCCTTTAAATGGCATTAAACCAATTTTAGAGAATCAAAAGCTTGTTTTTGGTGAGGCTATAACTGTAAAGA
TAAGCTATAACGATTGGGGAACTTTAATTAAGACAATAAGCTTTGCCAAAAATAAATTTATCGTTGCTGAGGTTGTTGGC
GAAGGAAAATATGAGACAGCAGTATGGGGAGGCTTAGCCTCTCTAAATGCCAAAATTAAGGGAGTTAGAGGAGTTGTTAT
AGATGGATGTGTTAGGGATGTTGAAGATATAAAAGCTTTAAAGTTCCCAGTTTTTGCAAAAAATTTCTGCCCTAATGCAG
GGAAACCTTTAAATCTTGGAGAGATAAATGTAGCAGTGAATTGTTGTGGTGTGATAGTTGAACCAGGAGATATTATTGTG
GGAGACTGCAATGGAGTGGTAGTTATAAAAAAAGAATCTCTTCCAGAGATTATTGAAAATGCTAAAAATATAAAAGAGAA
AGAAAGAAAAATTAGGGAAAGAATTCTAAGAGGGCAGGATTTAAGAGATGTTTTAAATTTAGAATAA

Upstream 100 bases:

>100_bases
GGCTAAGGAGGTTGCTGAAATAGGACTTTCACAGGAATAAAATTTATAAAGGAAATTGATGCCTTTAGGCATCTAAGTAC
CTTATTAAAACCTACAAACT

Downstream 100 bases:

>100_bases
ATTAGAATAAATAAAAATTAGGGTGATAAGTGTTGAGAATTCCACGTAGTCTGAAATCTATTATAAACACAATAAATGGA
GAATCTGGGACGAGATACAT

Product: S-adenosylmethionine:2-demethylmenaquinone methyltransferase MenG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKVLLKIIVGRAMNILKNFSVPNLCDAGAKPLNGIKPILENQKLVFGEAITVKISYNDWGTLIKTISFAKNKFIVAEVVG
EGKYETAVWGGLASLNAKIKGVRGVVIDGCVRDVEDIKALKFPVFAKNFCPNAGKPLNLGEINVAVNCCGVIVEPGDIIV
GDCNGVVVIKKESLPEIIENAKNIKEKERKIRERILRGQDLRDVLNLE

Sequences:

>Translated_208_residues
MKVLLKIIVGRAMNILKNFSVPNLCDAGAKPLNGIKPILENQKLVFGEAITVKISYNDWGTLIKTISFAKNKFIVAEVVG
EGKYETAVWGGLASLNAKIKGVRGVVIDGCVRDVEDIKALKFPVFAKNFCPNAGKPLNLGEINVAVNCCGVIVEPGDIIV
GDCNGVVVIKKESLPEIIENAKNIKEKERKIRERILRGQDLRDVLNLE
>Mature_208_residues
MKVLLKIIVGRAMNILKNFSVPNLCDAGAKPLNGIKPILENQKLVFGEAITVKISYNDWGTLIKTISFAKNKFIVAEVVG
EGKYETAVWGGLASLNAKIKGVRGVVIDGCVRDVEDIKALKFPVFAKNFCPNAGKPLNLGEINVAVNCCGVIVEPGDIIV
GDCNGVVVIKKESLPEIIENAKNIKEKERKIRERILRGQDLRDVLNLE

Specific function: Regulator Of Rnase E/Rne, Which Inhibits The Endonuclease Activity And Thereby Leads To Increase The Half-Life And Abundance Of Rnas. General Modulator Of RNA Abundance. Does Not Have Any Methyltransferase Activity. [C]

COG id: COG0684

COG function: function code H; Demethylmenaquinone methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y644_METJA (Q58060)

Other databases:

- EMBL:   L77117
- PIR:   D64380
- RefSeq:   NP_247628.1
- ProteinModelPortal:   Q58060
- SMR:   Q58060
- GeneID:   1451510
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0644
- NMPDR:   fig|243232.1.peg.665
- TIGR:   MJ0644
- HOGENOM:   HBG539095
- OMA:   VGDCNGV
- ProtClustDB:   CLSK796504
- BioCyc:   MJAN243232:MJ_0644-MONOMER
- InterPro:   IPR005493
- Gene3D:   G3DSA:3.50.30.40

Pfam domain/function: PF03737 Methyltransf_6; SSF89562 RNaseE_inh/diMeMenaQ_MeTrfase

EC number: NA

Molecular weight: Translated: 22709; Mature: 22709

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLKIIVGRAMNILKNFSVPNLCDAGAKPLNGIKPILENQKLVFGEAITVKISYNDWG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEEEEEECCHH
TLIKTISFAKNKFIVAEVVGEGKYETAVWGGLASLNAKIKGVRGVVIDGCVRDVEDIKAL
HHHHHHHHHCCCEEEEEEECCCCCCHHHHCCHHHCCCEECCCCEEEEHHHHHHHHHHHHH
KFPVFAKNFCPNAGKPLNLGEINVAVNCCGVIVEPGDIIVGDCNGVVVIKKESLPEIIEN
HCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCEEEEECCCCHHHHHH
AKNIKEKERKIRERILRGQDLRDVLNLE
HHHHHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MKVLLKIIVGRAMNILKNFSVPNLCDAGAKPLNGIKPILENQKLVFGEAITVKISYNDWG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEEEEEECCHH
TLIKTISFAKNKFIVAEVVGEGKYETAVWGGLASLNAKIKGVRGVVIDGCVRDVEDIKAL
HHHHHHHHHCCCEEEEEEECCCCCCHHHHCCHHHCCCEECCCCEEEEHHHHHHHHHHHHH
KFPVFAKNFCPNAGKPLNLGEINVAVNCCGVIVEPGDIIVGDCNGVVVIKKESLPEIIEN
HCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCEEEEECCCCHHHHHH
AKNIKEKERKIRERILRGQDLRDVLNLE
HHHHHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087