Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668752
Identifier: 15668752
GI number: 15668752
Start: 509859
End: 510119
Strand: Direct
Name: 15668752
Synonym: MJ0572
Alternate gene names: NA
Gene position: 509859-510119 (Clockwise)
Preceding gene: 15668751
Following gene: 15668753
Centisome position: 30.62
GC content: 30.27
Gene sequence:
>261_bases ATGGATGAAAATATTAAAAAGGCAGAGTATTATTATAAAAAAGGTGTAGAAGTTGGAAATAAAGGAGATGTAGAAAAAGC CTTAGAGTATTTTAACAAAGCAATAGAATTAAACCCATTTTATAGAGATGCATGGTTTAATAAAGCTTTAGCTCTGAGAA TTTTGGGGAGGTATGAGGAAGCAAGGGAGTGTTTTTTTAGAGGTTTAGCTGTTGAAAAACATCTGACGCATAAAAAATAT AATTCTGATGATGAAAAATGA
Upstream 100 bases:
>100_bases GGATTTGTTGAATTGTGTTAGAAAATTGCACGAGAAGTTTATTGAAAAAACTAACAGCTAAAATCTTTTATTTTTTATTT TTAATTTTTAGGGTGTTAAT
Downstream 100 bases:
>100_bases ATAAACTTCTTTATTTTATTTTAAAATTTATCGATATATTTAAATCTTTTTTAAAAATATTAAAATGTATTAATTAATCG AAAGGTATAAATATTACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MDENIKKAEYYYKKGVEVGNKGDVEKALEYFNKAIELNPFYRDAWFNKALALRILGRYEEARECFFRGLAVEKHLTHKKY NSDDEK
Sequences:
>Translated_86_residues MDENIKKAEYYYKKGVEVGNKGDVEKALEYFNKAIELNPFYRDAWFNKALALRILGRYEEARECFFRGLAVEKHLTHKKY NSDDEK >Mature_86_residues MDENIKKAEYYYKKGVEVGNKGDVEKALEYFNKAIELNPFYRDAWFNKALALRILGRYEEARECFFRGLAVEKHLTHKKY NSDDEK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y572_METJA (Q57992)
Other databases:
- EMBL: L77117 - PIR: D64371 - RefSeq: NP_247551.1 - ProteinModelPortal: Q57992 - SMR: Q57992 - GeneID: 1451437 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0572 - NMPDR: fig|243232.1.peg.588 - TIGR: MJ0572 - OMA: RILGRYE - ProtClustDB: CLSK876251 - BioCyc: MJAN243232:MJ_0572-MONOMER - GO: GO:0005488 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: PF00515 TPR_1
EC number: NA
Molecular weight: Translated: 10258; Mature: 10258
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS50005 TPR; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDENIKKAEYYYKKGVEVGNKGDVEKALEYFNKAIELNPFYRDAWFNKALALRILGRYEE CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ARECFFRGLAVEKHLTHKKYNSDDEK HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDENIKKAEYYYKKGVEVGNKGDVEKALEYFNKAIELNPFYRDAWFNKALALRILGRYEE CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ARECFFRGLAVEKHLTHKKYNSDDEK HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087