Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668742
Identifier: 15668742
GI number: 15668742
Start: 496687
End: 496911
Strand: Reverse
Name: 15668742
Synonym: MJ0562
Alternate gene names: NA
Gene position: 496911-496687 (Counterclockwise)
Preceding gene: 15668743
Following gene: 15668740
Centisome position: 29.85
GC content: 25.33
Gene sequence:
>225_bases GTGATAGGGATGAATTTTAAGGACCCAATTGAAGAATTACTAGACAATTACTTTAATGCAAAAAAAGAGTACGAAAAAAA TCCAATAGAAAAAAATTTAAATAGGTTAAAAAAGGCAGAAGCTAAGTTAATGATTAACTATCCAAATACTAATGCAACAT ACATTTACAAAAATAAAAAATACAAGATAATTATAAAAGATAGCGTTTCAGTAATTCCGATTTAG
Upstream 100 bases:
>100_bases AGTCCATTAAAACAAGAAAGGAAATCCTATTGAAAAAACTAAATAATAAGCTACAAATATGGTTTAAATCGGTAGGCTAT TAATATAATGATAAAAACAA
Downstream 100 bases:
>100_bases TTAGGCATGGTTTATATTAACCTTAAAAAAGATTATCTAATATAATATGAAATTTAGTTAAATTTTATAGCTCATTTCTT AAATCAATTGTTTGGTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MIGMNFKDPIEELLDNYFNAKKEYEKNPIEKNLNRLKKAEAKLMINYPNTNATYIYKNKKYKIIIKDSVSVIPI
Sequences:
>Translated_74_residues MIGMNFKDPIEELLDNYFNAKKEYEKNPIEKNLNRLKKAEAKLMINYPNTNATYIYKNKKYKIIIKDSVSVIPI >Mature_74_residues MIGMNFKDPIEELLDNYFNAKKEYEKNPIEKNLNRLKKAEAKLMINYPNTNATYIYKNKKYKIIIKDSVSVIPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y562_METJA (Q57982)
Other databases:
- EMBL: L77117 - PIR: B64370 - RefSeq: NP_247541.1 - GeneID: 1451427 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0562 - NMPDR: fig|243232.1.peg.578 - TIGR: MJ0562 - BioCyc: MJAN243232:MJ_0562-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8770; Mature: 8770
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGMNFKDPIEELLDNYFNAKKEYEKNPIEKNLNRLKKAEAKLMINYPNTNATYIYKNKK CCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCE YKIIIKDSVSVIPI EEEEEECCEEEECC >Mature Secondary Structure MIGMNFKDPIEELLDNYFNAKKEYEKNPIEKNLNRLKKAEAKLMINYPNTNATYIYKNKK CCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCE YKIIIKDSVSVIPI EEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087