Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668743
Identifier: 15668743
GI number: 15668743
Start: 497048
End: 497980
Strand: Reverse
Name: 15668743
Synonym: MJ0563
Alternate gene names: NA
Gene position: 497980-497048 (Counterclockwise)
Preceding gene: 15668744
Following gene: 15668742
Centisome position: 29.91
GC content: 29.8
Gene sequence:
>933_bases ATGAATGTTATTGATTTATTCTCTGGATGTGGAGGTTTTTCAAAAGGTTTTTTAGATGAAAACTTCAGAATTTTGGGAGC TATAGAGAACTTTAAGCCAGTTGTTAAAACTTATTTATACAATATAAAAGCCCCTGTCTGGATGGATGATATAAAGAGGA TTCCTCCGAAAGCGTTTGATGAATTTATAAAAAATGAGAAAGTTGATGTAATTATCGGCTCTCCTCCATGTGAGCCATTT ACAAAGGCAAATAAATTAATTAAAGACAATCCATTAGATAGATTATATAAAGACAAAGTTGGTAGGTTAGTTTTGTATTA TATAGATTATGTCAATTACTTTACACAAAGAAATGATGATTTAATATTTGTTATGGAAAATGTTCCACAAATTAAAGAAA TTAAGGATGAACTAAAAAAGTTGTTTGGAGATATAGGGCATAAGGTTTATTTTAATATATTAAGAGCAGAGGATTATGGA AATCCATCAAAAAGAGCGAGAATGTTTATTTCAAATATAAAATTAAAGCCAAAGAAAGTTGATAAACTTGTTGTTGTAGA AGAAGCTTTAAAAGACATTCCAAAAGACGCAAAAAATCATGAAATTAAAAAGTTATCTAAAGAAAAAGTAGAGATGATTT CAAAATTAAAGTGGGGTGAGGCATTATATAGATATAGAGGAAAGAAAAAGTTAATGTTTAATTGGTATAAGTTGCATCCT AAAAAATTAGCTCCAACTGTTAAAGGAAGGAGCAGGTTTATCCACCCTTATGAAGATAGGTTATTAACTGTAAGAGAACA GGCAAGATTGATGAGTTATCCTGATGATTTTGTATTCTTTGGAGGAAGAGATGTTCAGTATAATCAAATTGGAGAAAGTG TTCCTCCGATACTGGGTAGGGCTATAGCTAAAGAAATCAAAAAACAGTTATAA
Upstream 100 bases:
>100_bases ACTTAATGGAACGAGTTTTGATGAAACCGAAGCGTTAGCTTCGGGCTACAAAAACTCGAAGAGTTTTTGTTCAACTTTTA CTAAAAGTTTCGGTGAGAAT
Downstream 100 bases:
>100_bases TTTTGATGAACCTTTTACTAAAAGGTTTGAATAAGCAGTCCATTAAAACAAGAAAGGAAATCCTATTGAAAAAACTAAAT AATAAGCTACAAATATGGTT
Product: type II R/M system modification methyltransferase
Products: NA
Alternate protein names: Cytosine-specific methyltransferase MJ0563; M.MjaVIIIP
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFDEFIKNEKVDVIIGSPPCEPF TKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDDLIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYG NPSKRARMFISNIKLKPKKVDKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAIAKEIKKQL
Sequences:
>Translated_310_residues MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFDEFIKNEKVDVIIGSPPCEPF TKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDDLIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYG NPSKRARMFISNIKLKPKKVDKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAIAKEIKKQL >Mature_310_residues MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFDEFIKNEKVDVIIGSPPCEPF TKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDDLIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYG NPSKRARMFISNIKLKPKKVDKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAIAKEIKKQL
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MT51_METJA (Q57983)
Other databases:
- EMBL: L77117 - PIR: C64370 - RefSeq: NP_247542.1 - ProteinModelPortal: Q57983 - REBASE: 3888 - GeneID: 1451428 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0563 - NMPDR: fig|243232.1.peg.579 - TIGR: MJ0563 - HOGENOM: HBG682358 - OMA: RARMFIS - ProtClustDB: CLSK2749894 - BioCyc: MJAN243232:MJ_0563-MONOMER - BRENDA: 2.1.1.37 - InterPro: IPR001525 - PANTHER: PTHR10629 - PRINTS: PR00105 - TIGRFAMs: TIGR00675
Pfam domain/function: PF00145 DNA_methylase
EC number: =2.1.1.37
Molecular weight: Translated: 36290; Mature: 36290
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00094 C5_MTASE_1; PS00095 C5_MTASE_2
Important sites: ACT_SITE 77-77
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFD CCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHH EFIKNEKVDVIIGSPPCEPFTKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDD HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYGNPSKRARMFISNIKLKPKKV EEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH DKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCH KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGR HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHH AIAKEIKKQL HHHHHHHHCC >Mature Secondary Structure MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFD CCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHH EFIKNEKVDVIIGSPPCEPFTKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDD HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYGNPSKRARMFISNIKLKPKKV EEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH DKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCH KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGR HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHH AIAKEIKKQL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087