Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668693
Identifier: 15668693
GI number: 15668693
Start: 456399
End: 457625
Strand: Reverse
Name: 15668693
Synonym: MJ0514.2
Alternate gene names: NA
Gene position: 457625-456399 (Counterclockwise)
Preceding gene: 15668694
Following gene: 15668692
Centisome position: 27.49
GC content: 33.25
Gene sequence:
>1227_bases GTGATTGTTATGGCATCTTCGCTATGGTATCTTTATGAATTTGCAAGAAAAAAGTGGATTAAAAGATTTATTGATGCAAA ATCAGATAAAAGCTCCTATATTCCTCCAGAAAGATATAGAAAAATACCTCCAATTGTTAAATTTCCTGAGAAATGTATAT CCTGTGAAGGTTGTAAGGAAAGTTGTCCAGCCTTTGCAATTGAAATGATATACAACGAAGAGTATAACAAAAAACTTCCA GTGATTGATGAAGGTTCTTGTGTAGCATGTGCCAACTGTATTGAAGTTTGTCCAACAGGAGTTTTAGAGATGGATAAGCA TAGGGTTGAGACAGAGGGCTTATTTTTTGATAAACCTAAATATAGCAATCTTATAATTGACGAGGAAGTCTGTGTTAGAT GTGGAAATTGCGAAAGAGCTTGCCCAATCAATGTAATTGAGCGTAAAGAAGGGAAATATGTAATAAATATGGCTTTATGT ATTTCTTGTAAAGAATGTATCAAAGTTTGTCCTATAGAGAATGCAATAGTTGTTGTTGATGAAAAAACATTGAAAGAGAA GATAGATAAAGCCTTTGAAATTAAAAATAAAAAAATTACTGGGAAGTTGGAAATTAAGGAGAACGTTATTGAAAAAATTC CACATATTGTTAGTGGCTTGTGTGTAAGTTGTGGAATATGTAAAGATGTATGCGTAGGAGAGATTGATTTAAATGAAAAA AAGGTTGTTGAGTGCGTAAAGTGTGGTTTATGTATAGAAGTTTGTTCAACTACTGCAATAAGGATTTATAAACCAATTAT ACCAAAGAGGAAGGATATTTGCTACGTTATTGATGAGGATTTGTGTATTGGCTGTAGAATTTGTCAGAAAGTGTGTGGGT CAGGGGCTATTAAAATTAGCAAAGAGACAAAACTACCATATATTGTTCCAGAGTTGTGTGTTAGAGGAGGAGCATGCGCA AGAGAATGTCCTGTTGGAGCTATAAAAGTTGTTAAGCCAGAAGAGGCAGAAGAGGCGGTTAAAGTTAGAATAATAGAGGA TAAGATAATTGAGAGCATTGAGAAGGATTTAGTCTTATACACTGAGAAGTATGGAAAGGTTAAAGAAGAGATTGAAAAGT TATCCCTCAAAAAGTTGAAAGAAGAGCTAAAAAGGAGAGTTTATGAAGAAAATAAAAGAATAATGGAAAAAAAGAGGGAG CTGTATGATAAAGGAAATAATAGCTAA
Upstream 100 bases:
>100_bases TATCTGCTTATACAAGTATCGACCCTTGCGTTTCATGCACAGAGAGATGCATAGTTGCAGTAAAGGATGGCAAGGAGATT CCAATTAGTATTAAATTTAG
Downstream 100 bases:
>100_bases ACATTTCAATTTAGCTGATAAAAATATCCAATTACTCCCAAAATTTAATATTATTTTAAATAAAAGAGAGATTATCGTTA AAGAGGATAAATGCATTAGC
Product: polyferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MIVMASSLWYLYEFARKKWIKRFIDAKSDKSSYIPPERYRKIPPIVKFPEKCISCEGCKESCPAFAIEMIYNEEYNKKLP VIDEGSCVACANCIEVCPTGVLEMDKHRVETEGLFFDKPKYSNLIIDEEVCVRCGNCERACPINVIERKEGKYVINMALC ISCKECIKVCPIENAIVVVDEKTLKEKIDKAFEIKNKKITGKLEIKENVIEKIPHIVSGLCVSCGICKDVCVGEIDLNEK KVVECVKCGLCIEVCSTTAIRIYKPIIPKRKDICYVIDEDLCIGCRICQKVCGSGAIKISKETKLPYIVPELCVRGGACA RECPVGAIKVVKPEEAEEAVKVRIIEDKIIESIEKDLVLYTEKYGKVKEEIEKLSLKKLKEELKRRVYEENKRIMEKKRE LYDKGNNS
Sequences:
>Translated_408_residues MIVMASSLWYLYEFARKKWIKRFIDAKSDKSSYIPPERYRKIPPIVKFPEKCISCEGCKESCPAFAIEMIYNEEYNKKLP VIDEGSCVACANCIEVCPTGVLEMDKHRVETEGLFFDKPKYSNLIIDEEVCVRCGNCERACPINVIERKEGKYVINMALC ISCKECIKVCPIENAIVVVDEKTLKEKIDKAFEIKNKKITGKLEIKENVIEKIPHIVSGLCVSCGICKDVCVGEIDLNEK KVVECVKCGLCIEVCSTTAIRIYKPIIPKRKDICYVIDEDLCIGCRICQKVCGSGAIKISKETKLPYIVPELCVRGGACA RECPVGAIKVVKPEEAEEAVKVRIIEDKIIESIEKDLVLYTEKYGKVKEEIEKLSLKKLKEELKRRVYEENKRIMEKKRE LYDKGNNS >Mature_408_residues MIVMASSLWYLYEFARKKWIKRFIDAKSDKSSYIPPERYRKIPPIVKFPEKCISCEGCKESCPAFAIEMIYNEEYNKKLP VIDEGSCVACANCIEVCPTGVLEMDKHRVETEGLFFDKPKYSNLIIDEEVCVRCGNCERACPINVIERKEGKYVINMALC ISCKECIKVCPIENAIVVVDEKTLKEKIDKAFEIKNKKITGKLEIKENVIEKIPHIVSGLCVSCGICKDVCVGEIDLNEK KVVECVKCGLCIEVCSTTAIRIYKPIIPKRKDICYVIDEDLCIGCRICQKVCGSGAIKISKETKLPYIVPELCVRGGACA RECPVGAIKVVKPEEAEEAVKVRIIEDKIIESIEKDLVLYTEKYGKVKEEIEKLSLKKLKEELKRRVYEENKRIMEKKRE LYDKGNNS
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 4Fe-4S ferredoxin-type domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y51B_METJA (P81293)
Other databases:
- EMBL: L77117 - RefSeq: NP_247492.1 - ProteinModelPortal: P81293 - SMR: P81293 - GeneID: 1451378 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0514.2 - NMPDR: fig|243232.1.peg.529 - TIGR: MJ0514.2 - HOGENOM: HBG539071 - OMA: IGCRICY - ProtClustDB: CLSK876216 - BioCyc: MJAN243232:MJ_0514.2-MONOMER - GO: GO:0006810 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900
Pfam domain/function: PF00037 Fer4
EC number: NA
Molecular weight: Translated: 46462; Mature: 46462
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVMASSLWYLYEFARKKWIKRFIDAKSDKSSYIPPERYRKIPPIVKFPEKCISCEGCKE CEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHCCHHHCCCCCCHH SCPAFAIEMIYNEEYNKKLPVIDEGSCVACANCIEVCPTGVLEMDKHRVETEGLFFDKPK CCCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCC YSNLIIDEEVCVRCGNCERACPINVIERKEGKYVINMALCISCKECIKVCPIENAIVVVD CCCEEECHHHHHCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEC EKTLKEKIDKAFEIKNKKITGKLEIKENVIEKIPHIVSGLCVSCGICKDVCVGEIDLNEK CHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHH KVVECVKCGLCIEVCSTTAIRIYKPIIPKRKDICYVIDEDLCIGCRICQKVCGSGAIKIS HHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEE KETKLPYIVPELCVRGGACARECPVGAIKVVKPEEAEEAVKVRIIEDKIIESIEKDLVLY CCCCCCEECHHHHHCCCCCHHHCCCCEEEEECCCCHHHHHEEEEHHHHHHHHHHHHHHHH TEKYGKVKEEIEKLSLKKLKEELKRRVYEENKRIMEKKRELYDKGNNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIVMASSLWYLYEFARKKWIKRFIDAKSDKSSYIPPERYRKIPPIVKFPEKCISCEGCKE CEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHCCHHHCCCCCCHH SCPAFAIEMIYNEEYNKKLPVIDEGSCVACANCIEVCPTGVLEMDKHRVETEGLFFDKPK CCCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCC YSNLIIDEEVCVRCGNCERACPINVIERKEGKYVINMALCISCKECIKVCPIENAIVVVD CCCEEECHHHHHCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEC EKTLKEKIDKAFEIKNKKITGKLEIKENVIEKIPHIVSGLCVSCGICKDVCVGEIDLNEK CHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHH KVVECVKCGLCIEVCSTTAIRIYKPIIPKRKDICYVIDEDLCIGCRICQKVCGSGAIKIS HHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEE KETKLPYIVPELCVRGGACARECPVGAIKVVKPEEAEEAVKVRIIEDKIIESIEKDLVLY CCCCCCEECHHHHHCCCCCHHHCCCCEEEEECCCCHHHHHEEEEHHHHHHHHHHHHHHHH TEKYGKVKEEIEKLSLKKLKEELKRRVYEENKRIMEKKRELYDKGNNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087