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The map label for this gene is yfkH [H]

Identifier: 99081021

GI number: 99081021

Start: 1270487

End: 1271353

Strand: Direct

Name: yfkH [H]

Synonym: TM1040_1180

Alternate gene names: 99081021

Gene position: 1270487-1271353 (Clockwise)

Preceding gene: 99081020

Following gene: 99081022

Centisome position: 39.69

GC content: 60.44

Gene sequence:

>867_bases
ATGATGGCGATTGGCCAAGCCGTGATACAGGCTCTCGTGATTGCGCGCCGCGCGCTCGGGCGCTTCAGCCGCAAGAATGC
ATGGGTGCTGAGCAGCCATATCGCCATGTCGATGATGATGGCACTCTTTCCTTTTGTTCTCTTCACGGTGTCGCTGAGCG
GCGCCATCGCCAGCCTGTTTTCCCATCGCATCGTTGTGGATGACGTGGTCAATCTGGTGTTTGGCAGCTGGCCGCAGTCG
GTTGCTGAGCCGATCACCCGCGAGGTCTATGCCGTGCTCGAGACCTCTGGCACTGGCCTCATGACCCTTGGCGGGGTGCT
GGCGCTCTATTTTGCCTCCAATGGTGTGGATGCGATCCGTATCGCGATGCTCAGAGCCTACGGTCAGGAAGAAACACGTC
CCTTCTGGAAGCACCGCCTGATCTCCTTGGGGCTGGTGATCCTGGGCGGAGCAGGGCTGCTGCTGACAGCAGTGTTTGAA
CTGTTCTTGCCGCTGGGGGCGCGCTTTGTGGGGCGTTTCTTTCCGGATCTCGATTTTCTGCGAGGCTGGGAGCAGGGCGC
CAACGGGCTTGTTGTGGCCGTGATCCCGGTGGCGGCGGTGTTCCTCTATCACCTTGTTCTTCTGCCAAAGCGTGAAACCC
TGCGCCATGTGCTGCCAGGGGCGCTCGTGACGCTCGTGTTGTGGTGGGCGTCTGGTGCCGGGTTTGCGTTCTATGTCTCG
AGTTTTGCAAGCTATTCTGCCACCTATGCGGGGCTTGCGGGGGCGATGGCGGCGCTGATCTTTCTGTACCTCAATGCAGC
GATCCTGATCCTTGGTGCCGAGATCAACGGGGTCCTGCAAACCGACCGACAGGCGCGCGATGCCTGA

Upstream 100 bases:

>100_bases
GATAAGCACGGCATTTCTGGTGGCCGTGATGCGGTCCGGGCTGGCACATGGGCCTTTTCGCGATGAGTAAGCCCGCAGAT
TTGCCTTCTCAGAGGAGAGG

Downstream 100 bases:

>100_bases
TCTGTCGTCTTAAATTGTCCTGAAGCGCACGTTTTTCGCCGTATTTCAGCCCAGAGCTTGACCAGGCCTACGCAGTAGCT
AGGAGGAGGTGGATTTACGG

Product: ribonuclease BN, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MMAIGQAVIQALVIARRALGRFSRKNAWVLSSHIAMSMMMALFPFVLFTVSLSGAIASLFSHRIVVDDVVNLVFGSWPQS
VAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEETRPFWKHRLISLGLVILGGAGLLLTAVFE
LFLPLGARFVGRFFPDLDFLRGWEQGANGLVVAVIPVAAVFLYHLVLLPKRETLRHVLPGALVTLVLWWASGAGFAFYVS
SFASYSATYAGLAGAMAALIFLYLNAAILILGAEINGVLQTDRQARDA

Sequences:

>Translated_288_residues
MMAIGQAVIQALVIARRALGRFSRKNAWVLSSHIAMSMMMALFPFVLFTVSLSGAIASLFSHRIVVDDVVNLVFGSWPQS
VAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEETRPFWKHRLISLGLVILGGAGLLLTAVFE
LFLPLGARFVGRFFPDLDFLRGWEQGANGLVVAVIPVAAVFLYHLVLLPKRETLRHVLPGALVTLVLWWASGAGFAFYVS
SFASYSATYAGLAGAMAALIFLYLNAAILILGAEINGVLQTDRQARDA
>Mature_288_residues
MMAIGQAVIQALVIARRALGRFSRKNAWVLSSHIAMSMMMALFPFVLFTVSLSGAIASLFSHRIVVDDVVNLVFGSWPQS
VAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEETRPFWKHRLISLGLVILGGAGLLLTAVFE
LFLPLGARFVGRFFPDLDFLRGWEQGANGLVVAVIPVAAVFLYHLVLLPKRETLRHVLPGALVTLVLWWASGAGFAFYVS
SFASYSATYAGLAGAMAALIFLYLNAAILILGAEINGVLQTDRQARDA

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 31124; Mature: 31124

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]