Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081020

Identifier: 99081020

GI number: 99081020

Start: 1270013

End: 1270456

Strand: Direct

Name: 99081020

Synonym: TM1040_1179

Alternate gene names: NA

Gene position: 1270013-1270456 (Clockwise)

Preceding gene: 99081016

Following gene: 99081021

Centisome position: 39.68

GC content: 57.21

Gene sequence:

>444_bases
ATGACATTGATCCAGCAAATTTTCTGGGGGGGGCTGTTTCTGTTTGTATGCCTGATCCTCGAGACCATCATGCTTTTGTG
GTGTGCGGATGCGCTGCGACGCCATCGCATCCGCTTTCAACGTCTCTCGAGTATGGCGCATCAGACCGGGGTCCTGCTGA
TCTCGATCGGGTTCGTGGTCGGAGCGCATACGGCACAGATCTGGATCTGGTCCGCGGCGCTGTTGCTCAAGGCGCAGACC
TTTGAAACCTGGAACGAGGCGGTCTATTTCTCGGTCGCCACCTACACAACGCTGGGCTATGGCGACATCGTATTGGACGC
CGGACACAGGATTTTTGCGTCTTTTGCGGCCATGACGGGCATGCTCGCGTTTGGGATAAGCACGGCATTTCTGGTGGCCG
TGATGCGGTCCGGGCTGGCACATGGGCCTTTTCGCGATGAGTAA

Upstream 100 bases:

>100_bases
TGCCTCATGGATGTAATGCAGGCGTTGCACGATCAACCCCTGATTTCTAAGCTGCGCCAGAGTGCCGCCCTATTGACCGA
GCGAAGGACCCGCTACTTAG

Downstream 100 bases:

>100_bases
GCCCGCAGATTTGCCTTCTCAGAGGAGAGGATGATGGCGATTGGCCAAGCCGTGATACAGGCTCTCGTGATTGCGCGCCG
CGCGCTCGGGCGCTTCAGCC

Product: Ion transport 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTLIQQIFWGGLFLFVCLILETIMLLWCADALRRHRIRFQRLSSMAHQTGVLLISIGFVVGAHTAQIWIWSAALLLKAQT
FETWNEAVYFSVATYTTLGYGDIVLDAGHRIFASFAAMTGMLAFGISTAFLVAVMRSGLAHGPFRDE

Sequences:

>Translated_147_residues
MTLIQQIFWGGLFLFVCLILETIMLLWCADALRRHRIRFQRLSSMAHQTGVLLISIGFVVGAHTAQIWIWSAALLLKAQT
FETWNEAVYFSVATYTTLGYGDIVLDAGHRIFASFAAMTGMLAFGISTAFLVAVMRSGLAHGPFRDE
>Mature_146_residues
TLIQQIFWGGLFLFVCLILETIMLLWCADALRRHRIRFQRLSSMAHQTGVLLISIGFVVGAHTAQIWIWSAALLLKAQTF
ETWNEAVYFSVATYTTLGYGDIVLDAGHRIFASFAAMTGMLAFGISTAFLVAVMRSGLAHGPFRDE

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16392; Mature: 16260

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIQQIFWGGLFLFVCLILETIMLLWCADALRRHRIRFQRLSSMAHQTGVLLISIGFVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAHTAQIWIWSAALLLKAQTFETWNEAVYFSVATYTTLGYGDIVLDAGHRIFASFAAMTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCHHEECCCHHHHHHHHHHHH
MLAFGISTAFLVAVMRSGLAHGPFRDE
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TLIQQIFWGGLFLFVCLILETIMLLWCADALRRHRIRFQRLSSMAHQTGVLLISIGFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAHTAQIWIWSAALLLKAQTFETWNEAVYFSVATYTTLGYGDIVLDAGHRIFASFAAMTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCHHEECCCHHHHHHHHHHHH
MLAFGISTAFLVAVMRSGLAHGPFRDE
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA