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The map label for this gene is ccl2 [H]

Identifier: 99080969

GI number: 99080969

Start: 1213475

End: 1213960

Strand: Direct

Name: ccl2 [H]

Synonym: TM1040_1128

Alternate gene names: 99080969

Gene position: 1213475-1213960 (Clockwise)

Preceding gene: 99080968

Following gene: 99080970

Centisome position: 37.91

GC content: 63.37

Gene sequence:

>486_bases
ATGAGACCTCTGTTTTCTGTGGCGCGCATTCTCGCGGCCTGCCTTGCGGCCTTGGTCCTGAGCCTTTCACCTGCACTGGC
GGTGCAGCCGGACGAGGTTCTGGACGACCCGGTCCTGGAAGAGCGTGCGCGCGATCTCTCGGACGGGCTGCGCTGTCTTG
TGTGCCGCAACGAGAGCATCGACGAGTCCAACGCCGATCTGGCCCGCGATCTGCGCCTCTTGGTGCGCGAGCGCCTCGTC
GCCGGGGATAGCGACGAAGAAGCGATCGACTTTATCGTGGATCGGTACGGGGAATATGTGCTGCTCAAGCCCACAACGCA
GGGGGCCAATTGGATCCTCTGGGCGGCGGGGCCCATGATGCTGGCGCTCGCTCTGCTCATTTCGTTCATGTATCTGCGCG
GCCGCGCCACGGCGACGGCTGGACCAGAGGCAGACGGGCTCTCGGCCGAAGAACAAGAACGCCTGCGGGAAATTTTGAAA
GACTGA

Upstream 100 bases:

>100_bases
GCCTGCTGATGGCCCTTGGCGGCTTCCTGAGCCTCTCGGACCGTCGGTTCCGGGTTGCGGCCGGGGTGCGCAAGGCCCCC
ACCGAGGGGGTGCCCGCGGA

Downstream 100 bases:

>100_bases
GTTCTCTTCCCGTCCTGCGGGAAGGAGGGCGCCGAGGGCGTGCTGGATTGCCGCCCTTGGCATGATCTGCTAAAGAGGCC
TTGGTCTGCAGTTCACCAAG

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRPLFSVARILAACLAALVLSLSPALAVQPDEVLDDPVLEERARDLSDGLRCLVCRNESIDESNADLARDLRLLVRERLV
AGDSDEEAIDFIVDRYGEYVLLKPTTQGANWILWAAGPMMLALALLISFMYLRGRATATAGPEADGLSAEEQERLREILK
D

Sequences:

>Translated_161_residues
MRPLFSVARILAACLAALVLSLSPALAVQPDEVLDDPVLEERARDLSDGLRCLVCRNESIDESNADLARDLRLLVRERLV
AGDSDEEAIDFIVDRYGEYVLLKPTTQGANWILWAAGPMMLALALLISFMYLRGRATATAGPEADGLSAEEQERLREILK
D
>Mature_161_residues
MRPLFSVARILAACLAALVLSLSPALAVQPDEVLDDPVLEERARDLSDGLRCLVCRNESIDESNADLARDLRLLVRERLV
AGDSDEEAIDFIVDRYGEYVLLKPTTQGANWILWAAGPMMLALALLISFMYLRGRATATAGPEADGLSAEEQERLREILK
D

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=81, Percent_Identity=38.2716049382716, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 17741; Mature: 17741

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLFSVARILAACLAALVLSLSPALAVQPDEVLDDPVLEERARDLSDGLRCLVCRNESI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHEEEEECCCCC
DESNADLARDLRLLVRERLVAGDSDEEAIDFIVDRYGEYVLLKPTTQGANWILWAAGPMM
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCHHH
LALALLISFMYLRGRATATAGPEADGLSAEEQERLREILKD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRPLFSVARILAACLAALVLSLSPALAVQPDEVLDDPVLEERARDLSDGLRCLVCRNESI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHEEEEECCCCC
DESNADLARDLRLLVRERLVAGDSDEEAIDFIVDRYGEYVLLKPTTQGANWILWAAGPMM
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCHHH
LALALLISFMYLRGRATATAGPEADGLSAEEQERLREILKD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1310666 [H]