Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080938

Identifier: 99080938

GI number: 99080938

Start: 1176282

End: 1177466

Strand: Direct

Name: 99080938

Synonym: TM1040_1097

Alternate gene names: NA

Gene position: 1176282-1177466 (Clockwise)

Preceding gene: 99080937

Following gene: 99080939

Centisome position: 36.75

GC content: 65.99

Gene sequence:

>1185_bases
ATGCAGCAGCAGGGGCAGGGGACGAACTGGGTCATGGTGCTCTTGATCTGGGCCGCGGGCCTCGGCGCGGCGGCGCAATA
CGGCAAGATCGCCGTGATCTTTGACCAGCTGCCTGCGCTTTATCCCGGTGTGGGCGCGGCGATGGGCTGGACGGTGTCGC
TGGTGGGGGTGCTGGGGATCATTTTTGGCGTTGTGGCGGGGCTTTATGTGTCGGCCATCGGTTTTCGGCGTACGCTTGTT
CTGTCGCTGGTGCTTGGCGCGGGGGTCTCGGGCCTGCAGGCGCTGCATCTGCCCTTTGGCCTGTTTCTCATCACGCGCAT
GGTCGAGGGGATCTCCCATCTGGGCGTGGTTGTTGCGGCGCCGACGCTGATGGCGATCCTCGCGCGTGGCCCGGCGCGTG
GGGTGGCGCTGACGATCTGGAGTACGTTCTTTGGCGTTGCCTTTGCGCTCTTGACGTGGTTCGGGCTGCCGCTCGTCGAG
GCACGGGGCATCCCTGCGCTTTTTGCGGTGCATGCGGGGATGATGGGCCTTCTGGCGCTCATCCTGCATTGGGGGCTGCG
CGACTTGCCGGTGCCGCCGCGCGCCAGCTATCCTGATCTGCGCGCCTTGCCATCGCTGCATCTGAATATCTACCGATCGC
CGCACAAGCTGGCGCCTGCCGCGGGCTGGCTCTTTTATACCTGCTGCTTTGTGGCGGTGCTGACGGTGCTGCCGCCCTAT
ATCGCCGAGAGCCAGCGTGCGCATGTGATGGGGGCGATGCCTCTGGTGTCGATCGTGGTCTCTCTGACGCTTGGGGCTGG
CCTGCTGCGCGTGACCTCGGGGGTCAAAGTGGTGCAGCTTGGGTTCCTCATCGGCACGGTGGCGATGCTCTGGCTTTGGG
CGATGCCGGGGTACTGGCTGGCCTGCATGGTCTTGGCGGCGGGGTTCGGGCTGGTGCAGGGGGCCAGCTTTGCTTCTGTG
CCGCAGCTCAATGACACGCCTTCGACGCAATCAGAGGCCAATGGCGCCATGGCGCAGGCGGGCAACATGGGCAATGCCAT
CGGCACACCGCTGTTTGTCGCCGTGCTGACCTATGGGGGCTATGGCTCGCTGGTGCTGACCGTGGCGCTGCTGCTTTTGG
CCGGGGCCGTGGTGCATCAGGCGCTTGCGCTGCACCGGCAACGGGTGGCGCGGGGGGCGGTCTGA

Upstream 100 bases:

>100_bases
GTTTGTGTGGGTACAAAATAGCGCGTTATCGATCTGGCGCCCCGGAGCCGGGAGGCATAAGTTGGCCGCTCATTTTCTTT
ACAGGGTCGAGGGCGACGAG

Downstream 100 bases:

>100_bases
CAGTTTCTGTCAGGACAGATTTGCGCGTTCCCCCTCTGTTCCTCTTTTTCTCTTGGAGACTCGCGGCGGCTCACCTATGT
GTAGTTCAAAGTTTGGGGGC

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MQQQGQGTNWVMVLLIWAAGLGAAAQYGKIAVIFDQLPALYPGVGAAMGWTVSLVGVLGIIFGVVAGLYVSAIGFRRTLV
LSLVLGAGVSGLQALHLPFGLFLITRMVEGISHLGVVVAAPTLMAILARGPARGVALTIWSTFFGVAFALLTWFGLPLVE
ARGIPALFAVHAGMMGLLALILHWGLRDLPVPPRASYPDLRALPSLHLNIYRSPHKLAPAAGWLFYTCCFVAVLTVLPPY
IAESQRAHVMGAMPLVSIVVSLTLGAGLLRVTSGVKVVQLGFLIGTVAMLWLWAMPGYWLACMVLAAGFGLVQGASFASV
PQLNDTPSTQSEANGAMAQAGNMGNAIGTPLFVAVLTYGGYGSLVLTVALLLLAGAVVHQALALHRQRVARGAV

Sequences:

>Translated_394_residues
MQQQGQGTNWVMVLLIWAAGLGAAAQYGKIAVIFDQLPALYPGVGAAMGWTVSLVGVLGIIFGVVAGLYVSAIGFRRTLV
LSLVLGAGVSGLQALHLPFGLFLITRMVEGISHLGVVVAAPTLMAILARGPARGVALTIWSTFFGVAFALLTWFGLPLVE
ARGIPALFAVHAGMMGLLALILHWGLRDLPVPPRASYPDLRALPSLHLNIYRSPHKLAPAAGWLFYTCCFVAVLTVLPPY
IAESQRAHVMGAMPLVSIVVSLTLGAGLLRVTSGVKVVQLGFLIGTVAMLWLWAMPGYWLACMVLAAGFGLVQGASFASV
PQLNDTPSTQSEANGAMAQAGNMGNAIGTPLFVAVLTYGGYGSLVLTVALLLLAGAVVHQALALHRQRVARGAV
>Mature_394_residues
MQQQGQGTNWVMVLLIWAAGLGAAAQYGKIAVIFDQLPALYPGVGAAMGWTVSLVGVLGIIFGVVAGLYVSAIGFRRTLV
LSLVLGAGVSGLQALHLPFGLFLITRMVEGISHLGVVVAAPTLMAILARGPARGVALTIWSTFFGVAFALLTWFGLPLVE
ARGIPALFAVHAGMMGLLALILHWGLRDLPVPPRASYPDLRALPSLHLNIYRSPHKLAPAAGWLFYTCCFVAVLTVLPPY
IAESQRAHVMGAMPLVSIVVSLTLGAGLLRVTSGVKVVQLGFLIGTVAMLWLWAMPGYWLACMVLAAGFGLVQGASFASV
PQLNDTPSTQSEANGAMAQAGNMGNAIGTPLFVAVLTYGGYGSLVLTVALLLLAGAVVHQALALHRQRVARGAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41161; Mature: 41161

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA