Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yceG [C]

Identifier: 99080896

GI number: 99080896

Start: 1134335

End: 1135489

Strand: Direct

Name: yceG [C]

Synonym: TM1040_1055

Alternate gene names: 99080896

Gene position: 1134335-1135489 (Clockwise)

Preceding gene: 99080895

Following gene: 99080897

Centisome position: 35.44

GC content: 63.38

Gene sequence:

>1155_bases
ATGTGGCGCAGTCTGGCCTCGAACATGCTGACGATCCTGATCGTCGGCCTGTTTCTCTTCGCGGGGGTGATCCTGTGGGG
CAAGAATGAATACACCGCCGAGGGCCCCCTGTCCGAAGCGATCTGTTTTCAGGTGCCCTCGGGGACCAATATGGCACGGG
TGTCGCGCCGTCTTGAAAGCGACGGCGTGGTCTCGAGCGGCACCATCTTTCGCATCGGGGTGAAATATTCCGACAAGGCG
CAGGACCTCAAGGCAGGCAGCTACCTTGTGGAGCCCGGCGCTTCGATGGAAGGGATCGTGGATCAGATCACCCGGGGCGG
GGCCTCCACCTGTGGCACCGAGATCGTCTATCGCGTTGGCGTGACCCGCGTGCTGGCCGAGGTGCGCGAGCTGGACCCGG
CGACCAACGCCTTTGTGGAACGTGCTGAATTTGTCCCCGGCGTGGATGAGACCCCCGCGGTCTATACCGAGAAAAAATCC
GAGGCTGACACGCGCTACCGTATTGCACTGGCAGAAGGCGTGACCAGCTGGCAGGTGGTCGAGTCCCTGAAGGCGATGGA
CATTCTCGAGGGGGAGCCGGGCCGCCGTCCGCCGGAGGGCAGCCTTGCGCCCGACAGCTACGAGGTCCGCCCCGGAACCT
CGCGCGAGGCGGTGCTGGCCGAGATGCAGGCGCGGCAAGACAGGCGGATCGCGGACGCCTGGGAAGCCCGTAGCCCCGAT
GCGGCTGTCAAAACCCCAGAGGAAATGCTGATCCTCGCCTCGATCATCGAGAAGGAAACCGGCGTTGCTGAGGAACGCGG
TGTGGTGGCCTCTGTCTTCACCAACCGCCTGCGGCGCGGCATGCGCCTTCAGACCGACCCCACGGTGATCTATGGTGTGA
CCAAGGGAGAGGGCGTTCTGGGCCGGGGCCTACGGCAGAGCGAGCTGCGCGGCGCAACGCCGTGGAACACGTATGTGATC
GAAGGTCTTCCACCAACACCCATCGCCAATCCCGGGCTTGAAAGCCTGGTGGCGGCAGTGAACCCGGATCAGACTGACTA
TGTGTTCTTTGTGGCCGATGGCACCGGCGGCCATGCTTTTGCCGAAACGCTCGAAGAGCACAATCGCAACGTCGCGAAAT
GGCGAAAGATCGAAGCCGAGCGCAACAACAACTGA

Upstream 100 bases:

>100_bases
AATGCCAAGCGCGAACGCAAGATCGACGTGGCGCTGTCCAACTCCTTCGGCTTTGGCGGCACCAATGCTTCGGTGGTCTT
CGGGAAAGTGAGCGACTGAT

Downstream 100 bases:

>100_bases
CAGTCATGAGGGGGGCGCTGCCCCCCTCGTGCTTTGCTGGGCAAAGCCCTCACCCCCCGGGATATTTCAGGTTAGAAGAA
GGGCGGCCATGCGAGGGGCT

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MWRSLASNMLTILIVGLFLFAGVILWGKNEYTAEGPLSEAICFQVPSGTNMARVSRRLESDGVVSSGTIFRIGVKYSDKA
QDLKAGSYLVEPGASMEGIVDQITRGGASTCGTEIVYRVGVTRVLAEVRELDPATNAFVERAEFVPGVDETPAVYTEKKS
EADTRYRIALAEGVTSWQVVESLKAMDILEGEPGRRPPEGSLAPDSYEVRPGTSREAVLAEMQARQDRRIADAWEARSPD
AAVKTPEEMLILASIIEKETGVAEERGVVASVFTNRLRRGMRLQTDPTVIYGVTKGEGVLGRGLRQSELRGATPWNTYVI
EGLPPTPIANPGLESLVAAVNPDQTDYVFFVADGTGGHAFAETLEEHNRNVAKWRKIEAERNNN

Sequences:

>Translated_384_residues
MWRSLASNMLTILIVGLFLFAGVILWGKNEYTAEGPLSEAICFQVPSGTNMARVSRRLESDGVVSSGTIFRIGVKYSDKA
QDLKAGSYLVEPGASMEGIVDQITRGGASTCGTEIVYRVGVTRVLAEVRELDPATNAFVERAEFVPGVDETPAVYTEKKS
EADTRYRIALAEGVTSWQVVESLKAMDILEGEPGRRPPEGSLAPDSYEVRPGTSREAVLAEMQARQDRRIADAWEARSPD
AAVKTPEEMLILASIIEKETGVAEERGVVASVFTNRLRRGMRLQTDPTVIYGVTKGEGVLGRGLRQSELRGATPWNTYVI
EGLPPTPIANPGLESLVAAVNPDQTDYVFFVADGTGGHAFAETLEEHNRNVAKWRKIEAERNNN
>Mature_384_residues
MWRSLASNMLTILIVGLFLFAGVILWGKNEYTAEGPLSEAICFQVPSGTNMARVSRRLESDGVVSSGTIFRIGVKYSDKA
QDLKAGSYLVEPGASMEGIVDQITRGGASTCGTEIVYRVGVTRVLAEVRELDPATNAFVERAEFVPGVDETPAVYTEKKS
EADTRYRIALAEGVTSWQVVESLKAMDILEGEPGRRPPEGSLAPDSYEVRPGTSREAVLAEMQARQDRRIADAWEARSPD
AAVKTPEEMLILASIIEKETGVAEERGVVASVFTNRLRRGMRLQTDPTVIYGVTKGEGVLGRGLRQSELRGATPWNTYVI
EGLPPTPIANPGLESLVAAVNPDQTDYVFFVADGTGGHAFAETLEEHNRNVAKWRKIEAERNNN

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=364, Percent_Identity=32.6923076923077, Blast_Score=171, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 41863; Mature: 41863

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRSLASNMLTILIVGLFLFAGVILWGKNEYTAEGPLSEAICFQVPSGTNMARVSRRLES
CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHC
DGVVSSGTIFRIGVKYSDKAQDLKAGSYLVEPGASMEGIVDQITRGGASTCGTEIVYRVG
CCCCCCCCEEEEEECCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
VTRVLAEVRELDPATNAFVERAEFVPGVDETPAVYTEKKSEADTRYRIALAEGVTSWQVV
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEHHCCHHHHHH
ESLKAMDILEGEPGRRPPEGSLAPDSYEVRPGTSREAVLAEMQARQDRRIADAWEARSPD
HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
AAVKTPEEMLILASIIEKETGVAEERGVVASVFTNRLRRGMRLQTDPTVIYGVTKGEGVL
CCCCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCEECCCCEEEEEECCCCCHH
GRGLRQSELRGATPWNTYVIEGLPPTPIANPGLESLVAAVNPDQTDYVFFVADGTGGHAF
HCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHH
AETLEEHNRNVAKWRKIEAERNNN
HHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MWRSLASNMLTILIVGLFLFAGVILWGKNEYTAEGPLSEAICFQVPSGTNMARVSRRLES
CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHC
DGVVSSGTIFRIGVKYSDKAQDLKAGSYLVEPGASMEGIVDQITRGGASTCGTEIVYRVG
CCCCCCCCEEEEEECCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
VTRVLAEVRELDPATNAFVERAEFVPGVDETPAVYTEKKSEADTRYRIALAEGVTSWQVV
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEHHCCHHHHHH
ESLKAMDILEGEPGRRPPEGSLAPDSYEVRPGTSREAVLAEMQARQDRRIADAWEARSPD
HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
AAVKTPEEMLILASIIEKETGVAEERGVVASVFTNRLRRGMRLQTDPTVIYGVTKGEGVL
CCCCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCEECCCCEEEEEECCCCCHH
GRGLRQSELRGATPWNTYVIEGLPPTPIANPGLESLVAAVNPDQTDYVFFVADGTGGHAF
HCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHH
AETLEEHNRNVAKWRKIEAERNNN
HHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]