| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080897
Identifier: 99080897
GI number: 99080897
Start: 1135720
End: 1136163
Strand: Direct
Name: 99080897
Synonym: TM1040_1056
Alternate gene names: NA
Gene position: 1135720-1136163 (Clockwise)
Preceding gene: 99080896
Following gene: 99080898
Centisome position: 35.48
GC content: 62.84
Gene sequence:
>444_bases GTGGGGGCAAGGATCGCAGGACCTGGACGGGCCTTGATCCTCGCCTCCCGTTTCTCCCGTCGGATCGTTCAGAGACGAGG CTGTGCCCCCATGACATCACAGACCCCCGAAGAGCTGATCGAGATCAGTTCGGAGCTTTTGCGCTCGCTCCATGAGAGCC TCCGGCGCGCGCGCCGCGTGAGCGAGGAGTACCTCGCCCAGTATGAGGCCGAGCAGGACATCAATCCCGACACCGCCCAG TTGAAACCGCAGATCGCAAGGCTCGATGGCCTGATCCGTGACATTCAGAAAGTGGAGAAAACCCTTGTCGATCGCAAAGA CTCCTCTGGTGCCGCCCGCATGGTGGCCTTCGACCTCTGTGCCGCCCGCGATGAGATCGAGCGCCGCCTGGCTGGCCTGC GCGCCGCGATTCATGACGCAGATCTGGCTGGAGGAGATGGATGA
Upstream 100 bases:
>100_bases CGAGGCAGAGCCTCGCATCCCCTGTTGCCACAGGGGCGAACGCCGGATTGACGAGACCTTCAGGCGGCAGGTGTAAAACC TATCACAGCAGCTGGAAAAC
Downstream 100 bases:
>100_bases TCACACATTGGCCGCGCTGCCCTATATGTTTGATCTCTGGGCGCTCCCGCATCAGTGCCCCCCGCTGGGCGACTGGCGCG CCTGGGTGATCCTTGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MGARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRVSEEYLAQYEAEQDINPDTAQ LKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLCAARDEIERRLAGLRAAIHDADLAGGDG
Sequences:
>Translated_147_residues MGARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRVSEEYLAQYEAEQDINPDTAQ LKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLCAARDEIERRLAGLRAAIHDADLAGGDG >Mature_146_residues GARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRVSEEYLAQYEAEQDINPDTAQL KPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLCAARDEIERRLAGLRAAIHDADLAGGDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16280; Mature: 16149
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRV CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SEEYLAQYEAEQDINPDTAQLKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLC HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AARDEIERRLAGLRAAIHDADLAGGDG HHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SEEYLAQYEAEQDINPDTAQLKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLC HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AARDEIERRLAGLRAAIHDADLAGGDG HHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA