Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080897

Identifier: 99080897

GI number: 99080897

Start: 1135720

End: 1136163

Strand: Direct

Name: 99080897

Synonym: TM1040_1056

Alternate gene names: NA

Gene position: 1135720-1136163 (Clockwise)

Preceding gene: 99080896

Following gene: 99080898

Centisome position: 35.48

GC content: 62.84

Gene sequence:

>444_bases
GTGGGGGCAAGGATCGCAGGACCTGGACGGGCCTTGATCCTCGCCTCCCGTTTCTCCCGTCGGATCGTTCAGAGACGAGG
CTGTGCCCCCATGACATCACAGACCCCCGAAGAGCTGATCGAGATCAGTTCGGAGCTTTTGCGCTCGCTCCATGAGAGCC
TCCGGCGCGCGCGCCGCGTGAGCGAGGAGTACCTCGCCCAGTATGAGGCCGAGCAGGACATCAATCCCGACACCGCCCAG
TTGAAACCGCAGATCGCAAGGCTCGATGGCCTGATCCGTGACATTCAGAAAGTGGAGAAAACCCTTGTCGATCGCAAAGA
CTCCTCTGGTGCCGCCCGCATGGTGGCCTTCGACCTCTGTGCCGCCCGCGATGAGATCGAGCGCCGCCTGGCTGGCCTGC
GCGCCGCGATTCATGACGCAGATCTGGCTGGAGGAGATGGATGA

Upstream 100 bases:

>100_bases
CGAGGCAGAGCCTCGCATCCCCTGTTGCCACAGGGGCGAACGCCGGATTGACGAGACCTTCAGGCGGCAGGTGTAAAACC
TATCACAGCAGCTGGAAAAC

Downstream 100 bases:

>100_bases
TCACACATTGGCCGCGCTGCCCTATATGTTTGATCTCTGGGCGCTCCCGCATCAGTGCCCCCCGCTGGGCGACTGGCGCG
CCTGGGTGATCCTTGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MGARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRVSEEYLAQYEAEQDINPDTAQ
LKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLCAARDEIERRLAGLRAAIHDADLAGGDG

Sequences:

>Translated_147_residues
MGARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRVSEEYLAQYEAEQDINPDTAQ
LKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLCAARDEIERRLAGLRAAIHDADLAGGDG
>Mature_146_residues
GARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRVSEEYLAQYEAEQDINPDTAQL
KPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLCAARDEIERRLAGLRAAIHDADLAGGDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16280; Mature: 16149

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRV
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SEEYLAQYEAEQDINPDTAQLKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLC
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AARDEIERRLAGLRAAIHDADLAGGDG
HHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GARIAGPGRALILASRFSRRIVQRRGCAPMTSQTPEELIEISSELLRSLHESLRRARRV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SEEYLAQYEAEQDINPDTAQLKPQIARLDGLIRDIQKVEKTLVDRKDSSGAARMVAFDLC
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AARDEIERRLAGLRAAIHDADLAGGDG
HHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA