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The map label for this gene is 99080878

Identifier: 99080878

GI number: 99080878

Start: 1117856

End: 1118326

Strand: Reverse

Name: 99080878

Synonym: TM1040_1037

Alternate gene names: NA

Gene position: 1118326-1117856 (Counterclockwise)

Preceding gene: 99080883

Following gene: 99080877

Centisome position: 34.94

GC content: 57.96

Gene sequence:

>471_bases
ATGCATCGTCGTCATCTGATTTTGACCTTGGCGGCTCTTTTCCTCAACTCCGTGGCGGGATGCGCGCGCACCGACAATGA
TGTCAGCCGCAGCTTCAACCCTCCGCTTTATCCAAATGAAACGCCGGAGCTGCGGAAAAAGATCAATTATTGGGCCGATT
ACTATGAGGTGCCGCGCAGCCTCGTGCACCGACTCGCCATCCGCGAGAGCACGCACCGCCCCTGGGCCGTCAATCGCCCC
TATTACGGTCTGTTGCAGATTCTGCCTGCCACAGCGCGATCCATGGGGTTTCGGGGCCAGCCGCAGGAGCTTCTGGATGC
GGATACCAACCTGAAATACGCGGTGCGCTATCTGCGCGGAGCGTGGTTGATTTCCGATGGCAGTCAAGACAACGCAGTCA
AACATTATTCGCGCGGCTATTACTACGAAGCCAAGCGCCGTGGCATGCTCAAAGAGACCGGGCTACGCTGA

Upstream 100 bases:

>100_bases
CCGAAAGGTCGGCAAGGCTCCGCCTTGTCTAAAATTGCAGGTTTGCCGCCCCAAGCCGCCTCGATAGAGTGAGTGGGCGA
AACAACCGTGAGTTATCCCC

Downstream 100 bases:

>100_bases
GATCTGCCCGGCTCTCTCAGTCATGTCAGAGGCACATTTTGGAATTGGGACCTGAAGTCCGCTGTCGCCCTGTGCGCTGG
CGGACTTCAGCATCGCGCCC

Product: lytic transglycosylase, catalytic

Products: NA

Alternate protein names: Lytic Murein Transglycosylase; Transglycosylase; Transglycosylase Protein; Transglycosylase SLT Domain Protein; Transglycosylase Slt Family; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MHRRHLILTLAALFLNSVAGCARTDNDVSRSFNPPLYPNETPELRKKINYWADYYEVPRSLVHRLAIRESTHRPWAVNRP
YYGLLQILPATARSMGFRGQPQELLDADTNLKYAVRYLRGAWLISDGSQDNAVKHYSRGYYYEAKRRGMLKETGLR

Sequences:

>Translated_156_residues
MHRRHLILTLAALFLNSVAGCARTDNDVSRSFNPPLYPNETPELRKKINYWADYYEVPRSLVHRLAIRESTHRPWAVNRP
YYGLLQILPATARSMGFRGQPQELLDADTNLKYAVRYLRGAWLISDGSQDNAVKHYSRGYYYEAKRRGMLKETGLR
>Mature_156_residues
MHRRHLILTLAALFLNSVAGCARTDNDVSRSFNPPLYPNETPELRKKINYWADYYEVPRSLVHRLAIRESTHRPWAVNRP
YYGLLQILPATARSMGFRGQPQELLDADTNLKYAVRYLRGAWLISDGSQDNAVKHYSRGYYYEAKRRGMLKETGLR

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18158; Mature: 18158

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRRHLILTLAALFLNSVAGCARTDNDVSRSFNPPLYPNETPELRKKINYWADYYEVPRS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LVHRLAIRESTHRPWAVNRPYYGLLQILPATARSMGFRGQPQELLDADTNLKYAVRYLRG
HHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHH
AWLISDGSQDNAVKHYSRGYYYEAKRRGMLKETGLR
CEEECCCCCCHHHHHHHCCCEEHHHHCCCHHHCCCC
>Mature Secondary Structure
MHRRHLILTLAALFLNSVAGCARTDNDVSRSFNPPLYPNETPELRKKINYWADYYEVPRS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LVHRLAIRESTHRPWAVNRPYYGLLQILPATARSMGFRGQPQELLDADTNLKYAVRYLRG
HHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHH
AWLISDGSQDNAVKHYSRGYYYEAKRRGMLKETGLR
CEEECCCCCCHHHHHHHCCCEEHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA