Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080883

Identifier: 99080883

GI number: 99080883

Start: 1123134

End: 1123481

Strand: Reverse

Name: 99080883

Synonym: TM1040_1042

Alternate gene names: NA

Gene position: 1123481-1123134 (Counterclockwise)

Preceding gene: 99080884

Following gene: 99080878

Centisome position: 35.1

GC content: 53.45

Gene sequence:

>348_bases
TTGTGGTTTCGCGGCGTCTGGCCAATTTGGTACACGACAAACCAGATTTCGGGCGCAGTTGGCATGGAAGACAAGAACGA
CAGGGTTTCCACATCGCTCGCCCTATTAGTTGTCCTTTGGCCGGCTGGCCTCTGGCTCATTGGCTTCTTCGTCGCTCAAC
TTGCCCGGCTCAATGGCTGTAGGATATGGGCAAGAGGCCCTGAAGAATGCCTATTCTTAGGAACGGACGTCGGCGAATAC
ATCTACCCGCTTTGGTCGCTGGGATTCTACTTGATGGGTGTTTTTCTGTGGATTCCAATCGGGCTTATCCTTCTTGGCGT
CATCCGCTTCATCCGTCGTGCAAGCTGA

Upstream 100 bases:

>100_bases
GCTGAGGCTGCCCTTTGTCGGGAACAGAAAAGGCGGCATCTTCGGATGCCGCCTTTTTCTTTAGTAGTGTCTTCAAATCG
TTTGGTCTGTTTATAGCATC

Downstream 100 bases:

>100_bases
ACCTGACAGATCACAGCAATCGTTCTCCAAACCTAAAGCACCTCACCTCAATGCCCGTTGCATGGCGTCCGAAGGGTTAA
TACTTCTGGCGCGTGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MWFRGVWPIWYTTNQISGAVGMEDKNDRVSTSLALLVVLWPAGLWLIGFFVAQLARLNGCRIWARGPEECLFLGTDVGEY
IYPLWSLGFYLMGVFLWIPIGLILLGVIRFIRRAS

Sequences:

>Translated_115_residues
MWFRGVWPIWYTTNQISGAVGMEDKNDRVSTSLALLVVLWPAGLWLIGFFVAQLARLNGCRIWARGPEECLFLGTDVGEY
IYPLWSLGFYLMGVFLWIPIGLILLGVIRFIRRAS
>Mature_115_residues
MWFRGVWPIWYTTNQISGAVGMEDKNDRVSTSLALLVVLWPAGLWLIGFFVAQLARLNGCRIWARGPEECLFLGTDVGEY
IYPLWSLGFYLMGVFLWIPIGLILLGVIRFIRRAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13141; Mature: 13141

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFRGVWPIWYTTNQISGAVGMEDKNDRVSTSLALLVVLWPAGLWLIGFFVAQLARLNGC
CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIWARGPEECLFLGTDVGEYIYPLWSLGFYLMGVFLWIPIGLILLGVIRFIRRAS
EEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWFRGVWPIWYTTNQISGAVGMEDKNDRVSTSLALLVVLWPAGLWLIGFFVAQLARLNGC
CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIWARGPEECLFLGTDVGEYIYPLWSLGFYLMGVFLWIPIGLILLGVIRFIRRAS
EEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA