Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080854

Identifier: 99080854

GI number: 99080854

Start: 1083921

End: 1085192

Strand: Reverse

Name: 99080854

Synonym: TM1040_1013

Alternate gene names: NA

Gene position: 1085192-1083921 (Counterclockwise)

Preceding gene: 99080857

Following gene: 99080853

Centisome position: 33.9

GC content: 62.66

Gene sequence:

>1272_bases
ATGCCAACCGAACGCATCAGCTTTGCCGGCCATGCCGGACATGACCTCGCCGCGCGCCTCGACCTGCCCGAAGGGCCGGT
GTTGGCCACCGCCCTTTTTGCCCATTGTTTTACCTGCTCCAAAGACATCCCCGCCGCCCGGCGTATTGCCGCGCGTCTGG
CCGCCATGGGGATCGCGGTGCTGCGATTTGATTTCACCGGGCTGGGTCATTCGGGCGGCGAGTTTGCAAACACCAGCTTC
ACCTCCAATGTCGCCGATCTGATTGCGGCTGCGCGCTATCTGGCCAGCCGCAACATGGCGCCAGATATGCTGATCGGACA
TTCGCTGGGCGGTGCGGCGGTGCTGCGCGCGCGGGCAGGTATCCCCTCGGTCAAAAGCGTGGTGACGCTGGGTGCGCCCT
TTGATCCGGGTCATGTGGCGCATCATTTCGAGGATGCGCTGGAGGAAATCAACCGCACGGGCCGGGCCGAAGTAAACCTT
GGCGGGCGGCCCTTTGTGATCGGCAAGGAATTTGTCGATGACATCGGCCAGACGGAACTTGGAGAGGCGATCTCGGACCT
CAGGGCCGCACTTCTTGTGATGCATGCGCCGCGGGATGCCACGGTTTCGATCGACAACGCGGCCGAGATCTTTGGTGCGG
CGCGCCACCCCAAGAGCTTTGTCACCCTTGATGATGCCGATCACCTGATCACCGATCCCTGTGATGCCGAATATGCAGCA
GATATGATTGCCACCTGGGCCACGCGGTATGTAGACATGAAGCCCCCCGCGCCCCCGCCCGGCGCCCCAGAGGGTGTCAT
CCGCGTCACCGAGGCGGACCCGCAGGGGTTCTTGCAGGATGTGCAGAACGGCCCCTACCATCATCTGCTGGCTGACGAGC
CCGAAGCCTATGGTGGCACCAACCGGGGCCTGTCACCCTATGGGTTTGTGGCCGCCGGCCTTGGGGCCTGCACGTCGATG
ACCTTGCGGATGTATGCCCGGCGCAAAGACTGGCTCCTCGAGGGGATCAGCGTCGAGGTCTGCCACGACAAGGTCCATGC
GCAGGATGCCATCCCCTCTGGCCCTGCCAAGATCGATCGCTTCATGCGGGTGATCCATCTGCAGGGAGATCTAGATGCGG
AGCAGCGCGCCAAGCTTCTGGAGATTGCCGACAAATGCCCGGTGCATCGCACCCTTGAACAGAGCTCACGGGTCGAAACA
CGGTTGGAAGATGCACCAAAGCTGCCTGATATGTCCCGCGAAGGGCAGGATCTCGACACCGCCTCCATTTGA

Upstream 100 bases:

>100_bases
GAGCCATCGCCGACTTGCCGTTGCTCCCCCATCGGCGCAGTTTAAAGAGGTCGAACCACCCTCGCCAGCCCCGAAAGCCC
AACCCCCGAAAGCGACGCCC

Downstream 100 bases:

>100_bases
TCGACATCCCATTTGATCGACATCAATGTGCGGCGCGTCCTCTCGGCTAGGCTCTCCGGAGCCAGCAACAAGAGGATGCC
CGCCATGGGACTGATGCGCA

Product: OsmC-like protein

Products: NA

Alternate protein names: OsmC-Like Protein; Hydrolase; OsmC-Like Family Protein; Redox Protein; Osmc Family Protein; OsmC-Like Protein Superfamily Protein; Hydrolase Of Alpha/Beta Superfamily Protein; Alpha/Beta Hydrolase Fold Protein; OsmC-Like Protein/ Redox Protein; Redox Protein Regulator Of Disulfide Bond Formation; Alpha/Beta Fold Family Hydrolase; Regulator Of Disulfide Bond Formation Redox Protein; Hydrolytic Protein; Peptidase S; Secreted Protein

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MPTERISFAGHAGHDLAARLDLPEGPVLATALFAHCFTCSKDIPAARRIAARLAAMGIAVLRFDFTGLGHSGGEFANTSF
TSNVADLIAAARYLASRNMAPDMLIGHSLGGAAVLRARAGIPSVKSVVTLGAPFDPGHVAHHFEDALEEINRTGRAEVNL
GGRPFVIGKEFVDDIGQTELGEAISDLRAALLVMHAPRDATVSIDNAAEIFGAARHPKSFVTLDDADHLITDPCDAEYAA
DMIATWATRYVDMKPPAPPPGAPEGVIRVTEADPQGFLQDVQNGPYHHLLADEPEAYGGTNRGLSPYGFVAAGLGACTSM
TLRMYARRKDWLLEGISVEVCHDKVHAQDAIPSGPAKIDRFMRVIHLQGDLDAEQRAKLLEIADKCPVHRTLEQSSRVET
RLEDAPKLPDMSREGQDLDTASI

Sequences:

>Translated_423_residues
MPTERISFAGHAGHDLAARLDLPEGPVLATALFAHCFTCSKDIPAARRIAARLAAMGIAVLRFDFTGLGHSGGEFANTSF
TSNVADLIAAARYLASRNMAPDMLIGHSLGGAAVLRARAGIPSVKSVVTLGAPFDPGHVAHHFEDALEEINRTGRAEVNL
GGRPFVIGKEFVDDIGQTELGEAISDLRAALLVMHAPRDATVSIDNAAEIFGAARHPKSFVTLDDADHLITDPCDAEYAA
DMIATWATRYVDMKPPAPPPGAPEGVIRVTEADPQGFLQDVQNGPYHHLLADEPEAYGGTNRGLSPYGFVAAGLGACTSM
TLRMYARRKDWLLEGISVEVCHDKVHAQDAIPSGPAKIDRFMRVIHLQGDLDAEQRAKLLEIADKCPVHRTLEQSSRVET
RLEDAPKLPDMSREGQDLDTASI
>Mature_422_residues
PTERISFAGHAGHDLAARLDLPEGPVLATALFAHCFTCSKDIPAARRIAARLAAMGIAVLRFDFTGLGHSGGEFANTSFT
SNVADLIAAARYLASRNMAPDMLIGHSLGGAAVLRARAGIPSVKSVVTLGAPFDPGHVAHHFEDALEEINRTGRAEVNLG
GRPFVIGKEFVDDIGQTELGEAISDLRAALLVMHAPRDATVSIDNAAEIFGAARHPKSFVTLDDADHLITDPCDAEYAAD
MIATWATRYVDMKPPAPPPGAPEGVIRVTEADPQGFLQDVQNGPYHHLLADEPEAYGGTNRGLSPYGFVAAGLGACTSMT
LRMYARRKDWLLEGISVEVCHDKVHAQDAIPSGPAKIDRFMRVIHLQGDLDAEQRAKLLEIADKCPVHRTLEQSSRVETR
LEDAPKLPDMSREGQDLDTASI

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45386; Mature: 45255

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTERISFAGHAGHDLAARLDLPEGPVLATALFAHCFTCSKDIPAARRIAARLAAMGIAV
CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LRFDFTGLGHSGGEFANTSFTSNVADLIAAARYLASRNMAPDMLIGHSLGGAAVLRARAG
HEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHCC
IPSVKSVVTLGAPFDPGHVAHHFEDALEEINRTGRAEVNLGGRPFVIGKEFVDDIGQTEL
CCCHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHCCHHHH
GEAISDLRAALLVMHAPRDATVSIDNAAEIFGAARHPKSFVTLDDADHLITDPCDAEYAA
HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCCCHHCCCCCHHHHH
DMIATWATRYVDMKPPAPPPGAPEGVIRVTEADPQGFLQDVQNGPYHHLLADEPEAYGGT
HHHHHHHHHEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEECCCCCCHHCCCC
NRGLSPYGFVAAGLGACTSMTLRMYARRKDWLLEGISVEVCHDKVHAQDAIPSGPAKIDR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCHHHHHH
FMRVIHLQGDLDAEQRAKLLEIADKCPVHRTLEQSSRVETRLEDAPKLPDMSREGQDLDT
HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASI
CCC
>Mature Secondary Structure 
PTERISFAGHAGHDLAARLDLPEGPVLATALFAHCFTCSKDIPAARRIAARLAAMGIAV
CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LRFDFTGLGHSGGEFANTSFTSNVADLIAAARYLASRNMAPDMLIGHSLGGAAVLRARAG
HEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHCC
IPSVKSVVTLGAPFDPGHVAHHFEDALEEINRTGRAEVNLGGRPFVIGKEFVDDIGQTEL
CCCHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHCCHHHH
GEAISDLRAALLVMHAPRDATVSIDNAAEIFGAARHPKSFVTLDDADHLITDPCDAEYAA
HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCCCHHCCCCCHHHHH
DMIATWATRYVDMKPPAPPPGAPEGVIRVTEADPQGFLQDVQNGPYHHLLADEPEAYGGT
HHHHHHHHHEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEECCCCCCHHCCCC
NRGLSPYGFVAAGLGACTSMTLRMYARRKDWLLEGISVEVCHDKVHAQDAIPSGPAKIDR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCHHHHHH
FMRVIHLQGDLDAEQRAKLLEIADKCPVHRTLEQSSRVETRLEDAPKLPDMSREGQDLDT
HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA