| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080853
Identifier: 99080853
GI number: 99080853
Start: 1083576
End: 1083908
Strand: Reverse
Name: 99080853
Synonym: TM1040_1012
Alternate gene names: NA
Gene position: 1083908-1083576 (Counterclockwise)
Preceding gene: 99080854
Following gene: 99080852
Centisome position: 33.86
GC content: 62.16
Gene sequence:
>333_bases TTGATCGACATCAATGTGCGGCGCGTCCTCTCGGCTAGGCTCTCCGGAGCCAGCAACAAGAGGATGCCCGCCATGGGACT GATGCGCAAACTCGGCCACAGCGCCGATCTCGTCAATGGAATGAGCCAGCGGCTCGGTGTAGATCAGGCCGCCCGCATGG CCCGCGACCCAGAGCGTGAAGCGCGCCGCCTGATGCAAATGGTCACGCGCTGCGCCGGATGCCACGAGCAGGTCGCCTGT GGCGCGCTTCAAGCCGAGAATGATCATCTTTCGGCCTGCCCCAGCTATTGCGAGAACAAAGCCAGCTTTGAGATCCCGGA AACCCAGGTCTAA
Upstream 100 bases:
>100_bases CTCACGGGTCGAAACACGGTTGGAAGATGCACCAAAGCTGCCTGATATGTCCCGCGAAGGGCAGGATCTCGACACCGCCT CCATTTGATCGACATCCCAT
Downstream 100 bases:
>100_bases GGCACGTTTTCAACGGCAGATCGGGCCCTGCTGCGGCGCGGCGCTTGCCGCCGCGGCATCGCTCGTCTATGAGAGCGCCA TCTCTTCCACCGTCTTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPEREARRLMQMVTRCAGCHEQVAC GALQAENDHLSACPSYCENKASFEIPETQV
Sequences:
>Translated_110_residues MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPEREARRLMQMVTRCAGCHEQVAC GALQAENDHLSACPSYCENKASFEIPETQV >Mature_110_residues MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPEREARRLMQMVTRCAGCHEQVAC GALQAENDHLSACPSYCENKASFEIPETQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12116; Mature: 12116
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 11.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 11.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPERE CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHH ARRLMQMVTRCAGCHEQVACGALQAENDHLSACPSYCENKASFEIPETQV HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPERE CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHH ARRLMQMVTRCAGCHEQVACGALQAENDHLSACPSYCENKASFEIPETQV HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA