Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080853

Identifier: 99080853

GI number: 99080853

Start: 1083576

End: 1083908

Strand: Reverse

Name: 99080853

Synonym: TM1040_1012

Alternate gene names: NA

Gene position: 1083908-1083576 (Counterclockwise)

Preceding gene: 99080854

Following gene: 99080852

Centisome position: 33.86

GC content: 62.16

Gene sequence:

>333_bases
TTGATCGACATCAATGTGCGGCGCGTCCTCTCGGCTAGGCTCTCCGGAGCCAGCAACAAGAGGATGCCCGCCATGGGACT
GATGCGCAAACTCGGCCACAGCGCCGATCTCGTCAATGGAATGAGCCAGCGGCTCGGTGTAGATCAGGCCGCCCGCATGG
CCCGCGACCCAGAGCGTGAAGCGCGCCGCCTGATGCAAATGGTCACGCGCTGCGCCGGATGCCACGAGCAGGTCGCCTGT
GGCGCGCTTCAAGCCGAGAATGATCATCTTTCGGCCTGCCCCAGCTATTGCGAGAACAAAGCCAGCTTTGAGATCCCGGA
AACCCAGGTCTAA

Upstream 100 bases:

>100_bases
CTCACGGGTCGAAACACGGTTGGAAGATGCACCAAAGCTGCCTGATATGTCCCGCGAAGGGCAGGATCTCGACACCGCCT
CCATTTGATCGACATCCCAT

Downstream 100 bases:

>100_bases
GGCACGTTTTCAACGGCAGATCGGGCCCTGCTGCGGCGCGGCGCTTGCCGCCGCGGCATCGCTCGTCTATGAGAGCGCCA
TCTCTTCCACCGTCTTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPEREARRLMQMVTRCAGCHEQVAC
GALQAENDHLSACPSYCENKASFEIPETQV

Sequences:

>Translated_110_residues
MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPEREARRLMQMVTRCAGCHEQVAC
GALQAENDHLSACPSYCENKASFEIPETQV
>Mature_110_residues
MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPEREARRLMQMVTRCAGCHEQVAC
GALQAENDHLSACPSYCENKASFEIPETQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12116; Mature: 12116

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
11.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPERE
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHH
ARRLMQMVTRCAGCHEQVACGALQAENDHLSACPSYCENKASFEIPETQV
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIDINVRRVLSARLSGASNKRMPAMGLMRKLGHSADLVNGMSQRLGVDQAARMARDPERE
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHH
ARRLMQMVTRCAGCHEQVACGALQAENDHLSACPSYCENKASFEIPETQV
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA