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The map label for this gene is 99080834

Identifier: 99080834

GI number: 99080834

Start: 1065465

End: 1066124

Strand: Direct

Name: 99080834

Synonym: TM1040_0993

Alternate gene names: NA

Gene position: 1065465-1066124 (Clockwise)

Preceding gene: 99080833

Following gene: 99080836

Centisome position: 33.29

GC content: 59.85

Gene sequence:

>660_bases
ATGACCCCAATTTTGAGACTCCCAGGCGTCGGGCCGGCATTGGCGAAGGCTTTGCAGGATCACGGTATTCGCAGTGTCGA
AGATGTCGCTGCACGATCCGAAGCCGAGTTGACGGCGGTGCCCCGGCTGGGGGTTGCGCGCGCTCAACGCCTGAAAGCCG
CTGCGCAAGACATGACCAAGGCAGCTGCAGAACCTGCGGCTCCACGTGCGGCCAAATCTACGGCGCGTGCCAAAGCCCCA
GCCAAGCCCCGCACGGCCCGCGTTAAACCGGCCAAACTCAAGGCGGTGGAGGCCGCAAAGGATGCGGCGCAGTCTGCGGC
CAAGGCCGTAAAGGCAGGCGTGAACGCTTCTGAGGAAGAGACCCGCGAAAGCCTGCAAAGTGCGGTCGCGGCGGCAGAGG
CCGCACGTCTGGCGGCGGAAGAAAAAGCGGCCAAGGCTGAGGCCAAGGCGGCCAAAGCTGCCAAGAAGGCCAAGGCGCTG
ATGGCCCAGTTTGCTGAGGCCAAGGAAAAAGCCTCCTCCAAAGCCGCCAAGGAAAAGACCAAAGCCAAGAAGGAAATCGC
CAAGGAGAAAGCCAAGGCGAAGAAAATCCTCAAGGAGCAATCGGACGAAAAACCAAAGAAGAGCAAAAAAGCCAAGAAAA
AGAAGAAGAAGGACAAATAG

Upstream 100 bases:

>100_bases
GCGCACAATCCGTACGCATGAGAGGTTGGACAGATCGTCGAACCCGGTGCTACGCTCGCGATGTGATTGACTTCAGGCAG
GTGTGAGGAACGAGGAACGC

Downstream 100 bases:

>100_bases
ACTTTGTGGCTTAGGGCCTTTGAGTGAAAAAACCGGTGCGATGTGGCACCGGTTTTTCTGTTTTAACGCTCTGTTGCGAT
GGGCTGGGGGACACCCCTCG

Product: helix-hairpin-helix DNA-binding, class 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTPILRLPGVGPALAKALQDHGIRSVEDVAARSEAELTAVPRLGVARAQRLKAAAQDMTKAAAEPAAPRAAKSTARAKAP
AKPRTARVKPAKLKAVEAAKDAAQSAAKAVKAGVNASEEETRESLQSAVAAAEAARLAAEEKAAKAEAKAAKAAKKAKAL
MAQFAEAKEKASSKAAKEKTKAKKEIAKEKAKAKKILKEQSDEKPKKSKKAKKKKKKDK

Sequences:

>Translated_219_residues
MTPILRLPGVGPALAKALQDHGIRSVEDVAARSEAELTAVPRLGVARAQRLKAAAQDMTKAAAEPAAPRAAKSTARAKAP
AKPRTARVKPAKLKAVEAAKDAAQSAAKAVKAGVNASEEETRESLQSAVAAAEAARLAAEEKAAKAEAKAAKAAKKAKAL
MAQFAEAKEKASSKAAKEKTKAKKEIAKEKAKAKKILKEQSDEKPKKSKKAKKKKKKDK
>Mature_218_residues
TPILRLPGVGPALAKALQDHGIRSVEDVAARSEAELTAVPRLGVARAQRLKAAAQDMTKAAAEPAAPRAAKSTARAKAPA
KPRTARVKPAKLKAVEAAKDAAQSAAKAVKAGVNASEEETRESLQSAVAAAEAARLAAEEKAAKAEAKAAKAAKKAKALM
AQFAEAKEKASSKAAKEKTKAKKEIAKEKAKAKKILKEQSDEKPKKSKKAKKKKKKDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22895; Mature: 22764

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPILRLPGVGPALAKALQDHGIRSVEDVAARSEAELTAVPRLGVARAQRLKAAAQDMTK
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AAAEPAAPRAAKSTARAKAPAKPRTARVKPAKLKAVEAAKDAAQSAAKAVKAGVNASEEE
HHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TRESLQSAVAAAEAARLAAEEKAAKAEAKAAKAAKKAKALMAQFAEAKEKASSKAAKEKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKKEIAKEKAKAKKILKEQSDEKPKKSKKAKKKKKKDK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPILRLPGVGPALAKALQDHGIRSVEDVAARSEAELTAVPRLGVARAQRLKAAAQDMTK
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AAAEPAAPRAAKSTARAKAPAKPRTARVKPAKLKAVEAAKDAAQSAAKAVKAGVNASEEE
HHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TRESLQSAVAAAEAARLAAEEKAAKAEAKAAKAAKKAKALMAQFAEAKEKASSKAAKEKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKKEIAKEKAKAKKILKEQSDEKPKKSKKAKKKKKKDK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA