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The map label for this gene is yajC [H]

Identifier: 99080836

GI number: 99080836

Start: 1067792

End: 1068076

Strand: Direct

Name: yajC [H]

Synonym: TM1040_0995

Alternate gene names: 99080836

Gene position: 1067792-1068076 (Clockwise)

Preceding gene: 99080834

Following gene: 99080837

Centisome position: 33.36

GC content: 57.54

Gene sequence:

>285_bases
ATGGAAGGTGGCGCAATCGCCCAGTTTATCCCGCTGATCCTGATCTTTGCGATCATGTACTTCCTGCTCATTCGTCCGCA
GCAGAAGAAAATGAAGCAGCATCAGAACATGGTCGAGGCCCTGCGCCGTGGCGACCAGGTTGTCACCCAGGGTGGCGTGA
TCGGCAAGGTCTCCAAGGTCAAGGAAGACGGCGAGCTTGAGATCGAGATCGCAGAGGGCGTGAAGGTGCGCGTGGTGAAA
TCCACCATCGCTCAGGTGCTGAACAAGACCGAGCCCGCATCCTGA

Upstream 100 bases:

>100_bases
GAACAGCATCGCCCCGCCTTGCAAAGCCCTGATGCACCGCATAGGTTCCACGCAAAATCCGGGCGCTGACGTGGCCCCCA
AAGACAGAAGGAAATACCCC

Downstream 100 bases:

>100_bases
ACCCCGCCGCTGAGGCAACGAAAAAGGCAGGGTAATGCTGCAAATTGATACCTGGAAGAGGGTTCTCATCTGGCTGGTCT
GTGTGGCCGGCCTTTTGGCT

Product: protein translocase subunit yajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MEGGAIAQFIPLILIFAIMYFLLIRPQQKKMKQHQNMVEALRRGDQVVTQGGVIGKVSKVKEDGELEIEIAEGVKVRVVK
STIAQVLNKTEPAS

Sequences:

>Translated_94_residues
MEGGAIAQFIPLILIFAIMYFLLIRPQQKKMKQHQNMVEALRRGDQVVTQGGVIGKVSKVKEDGELEIEIAEGVKVRVVK
STIAQVLNKTEPAS
>Mature_94_residues
MEGGAIAQFIPLILIFAIMYFLLIRPQQKKMKQHQNMVEALRRGDQVVTQGGVIGKVSKVKEDGELEIEIAEGVKVRVVK
STIAQVLNKTEPAS

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=92, Percent_Identity=38.0434782608696, Blast_Score=74, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 10404; Mature: 10404

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGGAIAQFIPLILIFAIMYFLLIRPQQKKMKQHQNMVEALRRGDQVVTQGGVIGKVSKV
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHC
KEDGELEIEIAEGVKVRVVKSTIAQVLNKTEPAS
CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEGGAIAQFIPLILIFAIMYFLLIRPQQKKMKQHQNMVEALRRGDQVVTQGGVIGKVSKV
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHC
KEDGELEIEIAEGVKVRVVKSTIAQVLNKTEPAS
CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]