| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080799
Identifier: 99080799
GI number: 99080799
Start: 1023637
End: 1023972
Strand: Reverse
Name: 99080799
Synonym: TM1040_0958
Alternate gene names: NA
Gene position: 1023972-1023637 (Counterclockwise)
Preceding gene: 99080801
Following gene: 99080795
Centisome position: 31.99
GC content: 60.42
Gene sequence:
>336_bases ATGAGCACACCTGTTTCCTCGATTAAAAACCTCGGCCCCGCCTATGAGACCGCCTGCACCCGCGCGGGCATCCATTCCGC CGAGGAGCTGCGCGCCCTCGGGGCGGACGCGGCCTACGGCAAACTGCTTCAATCCGGCAGCAAACCGCATTTCATAGGCT ACTATGTTTTGGTGATGGCGCTTCAGGGGCGGCCCTGGAACGATTGCAAGGGCGAAGAGAAAAAGGTCCTGCGCAAGCGC TTTGATGCGCTGAAGGCGCAGAGCTTTGACAGCGACCGGTCCGCGCTGGATGCGATCTTGAACGAGATCGGTGTGATCGA GCGACGCACAGACTGA
Upstream 100 bases:
>100_bases GAGAATCAACAGGCTGTCCGTGCCATATCTGCCCTTAAAAAGAGGGGCTGCGTGCGGATCTTCTGCTGACGTCGCCAACA GCAAAGATTAAACTCGCCGC
Downstream 100 bases:
>100_bases TACCGCGCCCGGCCCCTCTCAAAAGAAAACCGCCACGCATGCAGCGTGGCGGTTTTTGATTTTCAGCTGGCCCCCTCGAG GCCCCTGCCCGTCGTCGCAG
Product: TfoX domain-containing protein
Products: NA
Alternate protein names: TfoX Domain-Containing Protein; TfoX-Like
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSTPVSSIKNLGPAYETACTRAGIHSAEELRALGADAAYGKLLQSGSKPHFIGYYVLVMALQGRPWNDCKGEEKKVLRKR FDALKAQSFDSDRSALDAILNEIGVIERRTD
Sequences:
>Translated_111_residues MSTPVSSIKNLGPAYETACTRAGIHSAEELRALGADAAYGKLLQSGSKPHFIGYYVLVMALQGRPWNDCKGEEKKVLRKR FDALKAQSFDSDRSALDAILNEIGVIERRTD >Mature_110_residues STPVSSIKNLGPAYETACTRAGIHSAEELRALGADAAYGKLLQSGSKPHFIGYYVLVMALQGRPWNDCKGEEKKVLRKRF DALKAQSFDSDRSALDAILNEIGVIERRTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12186; Mature: 12055
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPVSSIKNLGPAYETACTRAGIHSAEELRALGADAAYGKLLQSGSKPHFIGYYVLVMA CCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHH LQGRPWNDCKGEEKKVLRKRFDALKAQSFDSDRSALDAILNEIGVIERRTD HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STPVSSIKNLGPAYETACTRAGIHSAEELRALGADAAYGKLLQSGSKPHFIGYYVLVMA CCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHH LQGRPWNDCKGEEKKVLRKRFDALKAQSFDSDRSALDAILNEIGVIERRTD HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA