Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080790

Identifier: 99080790

GI number: 99080790

Start: 1013114

End: 1014253

Strand: Reverse

Name: 99080790

Synonym: TM1040_0949

Alternate gene names: NA

Gene position: 1014253-1013114 (Counterclockwise)

Preceding gene: 99080793

Following gene: 99080789

Centisome position: 31.69

GC content: 60.09

Gene sequence:

>1140_bases
GTGTCACGCTACGACAGATATGTGCTGTCGCAATATCTTTTGTTCTTTGGCTTTTTTGCCTTGATTCTGGTGGCCGTGTT
CTGGATCAACCGGGCCGTAAGCCTGTTTGACTGGCTCATTGGCGATGGCCAAAGCGTTCTCGCGTTCCTCGAGATCTCTG
CGCTGAGCCTGCCGAACCTTGTGCGCATGGTGCTCCCGCTGGCCGCGTTTGCGGCGACGGTCTGGGTCACCAACCGGCTG
AACTCTGAGAGCGAATTGACGGTATTGCGCGCAACCGGCTCAAGCCCGTGGCAACTGGCCCGACCGGCCATGGTCTTTGG
GCTGTTGAGCGCTGCGATGATGTCAGCCCTGAGCCTGTTTCTCTTGCCGGCCTCGCTTGCGCAAATGCAGTTTCGCGAGG
CGGAACTCTCGCGCAGCGTCAGCGCCAAGCTGTTGAATGCCGGGAGTTTCCTCCACCCAAGCGAGGGCATCACGTTTTTC
ATCGGCTCGATTGAGCCGGATGGAACGTTGCAGAATGTATTCCTTACAGATCAGCGCGACCCCTCTGTGGAAATCACATA
CACCAGTGATCGCGCCTATCTGGTGCGTGAAGACGACGAAGCCCACCTGATCCTCGTGGACGGGCTCGCGCAGCGCAAAG
AGGCCCATAACGATCGTCTTTCGACCACGGCGTTCTCGGATTTTTCATACCCGCTTGGGGATCTTTCGCCCGCACGCGCT
GCAGGCGCGCGCCCGCTGCGCAATATTCCCACGCTTGATCTGCTGCGCGAACGCGCAAGCATCACCGAAGAGGAAGGCCA
TAGCGCCGGGGCTCAGGCCGAAGAGTTGCACCTGCGTTTTGCGCGGGCGGCGGTGACCTTTGCGGTGGTGATGATCGGGG
TCTCGACCCTGTTGATGGGGGGCTTCAGTCGCTTTGGGATCTGGAAACAGGTGCTTGGGGCCTTTGTGCTATTGATCCTG
ATCGAAGGCATGCGGGGGGTCGTCGCCGACCCGGTACGGGAAAATGCGGCGATGTGGCCGCTCATCTACCTGCCTGCGAC
GTTGGGCGTGATGATTTCGGTTCTGTTTCTGCATCTGGCGACGCGGCCGCAGGCCCTGATGCGGCTCACGAGGCGCAAGA
CGCAGGAGACAGACGCATGA

Upstream 100 bases:

>100_bases
CCCATCCGACATCTGGCGCGGAAGATTGCAGTTTTCCCCTTCGCACAATTCCTCTAAGGTCCGGCGAACAATTCGATCGC
AAGATCTATGGGGGGATCGA

Downstream 100 bases:

>100_bases
TCCTTGATCTCTATTATGCCCGCCGCTTCTTGCAATGGTTCATGGTGATCGCCGCCGTCCTCATGAGTCTGGTGATGCTG
ATCGACCTCAGCGAACAATT

Product: permease YjgP/YjgQ

Products: NA

Alternate protein names: Permease YjgP/YjgQ; Permease; Permease YjgP/YjgQ Family; Permease Protein; Transporter YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Permease YjgP

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNLVRMVLPLAAFAATVWVTNRL
NSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLFLLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFF
IGSIEPDGTLQNVFLTDQRDPSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARA
AGARPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLMGGFSRFGIWKQVLGAFVLLIL
IEGMRGVVADPVRENAAMWPLIYLPATLGVMISVLFLHLATRPQALMRLTRRKTQETDA

Sequences:

>Translated_379_residues
MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNLVRMVLPLAAFAATVWVTNRL
NSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLFLLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFF
IGSIEPDGTLQNVFLTDQRDPSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARA
AGARPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLMGGFSRFGIWKQVLGAFVLLIL
IEGMRGVVADPVRENAAMWPLIYLPATLGVMISVLFLHLATRPQALMRLTRRKTQETDA
>Mature_378_residues
SRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNLVRMVLPLAAFAATVWVTNRLN
SESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLFLLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFFI
GSIEPDGTLQNVFLTDQRDPSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARAA
GARPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLMGGFSRFGIWKQVLGAFVLLILI
EGMRGVVADPVRENAAMWPLIYLPATLGVMISVLFLHLATRPQALMRLTRRKTQETDA

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41827; Mature: 41696

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHH
VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLF
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFFIGSIEPDGTLQNVFLTDQRD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
PSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARA
CCEEEEEECCCEEEEEECCCCEEEEECCHHHHHHHHCCCCCHHEECCCCCCCCCCCCHHH
AGARPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLMG
CCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFSRFGIWKQVLGAFVLLILIEGMRGVVADPVRENAAMWPLIYLPATLGVMISVLFLHLA
CHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRPQALMRLTRRKTQETDA
CCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHH
VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLF
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFFIGSIEPDGTLQNVFLTDQRD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
PSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARA
CCEEEEEECCCEEEEEECCCCEEEEECCHHHHHHHHCCCCCHHEECCCCCCCCCCCCHHH
AGARPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLMG
CCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFSRFGIWKQVLGAFVLLILIEGMRGVVADPVRENAAMWPLIYLPATLGVMISVLFLHLA
CHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRPQALMRLTRRKTQETDA
CCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA