| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yjgQ [C]
Identifier: 99080789
GI number: 99080789
Start: 1012011
End: 1013117
Strand: Reverse
Name: yjgQ [C]
Synonym: TM1040_0948
Alternate gene names: 99080789
Gene position: 1013117-1012011 (Counterclockwise)
Preceding gene: 99080790
Following gene: 99080788
Centisome position: 31.65
GC content: 61.25
Gene sequence:
>1107_bases ATGATCCTTGATCTCTATTATGCCCGCCGCTTCTTGCAATGGTTCATGGTGATCGCCGCCGTCCTCATGAGTCTGGTGAT GCTGATCGACCTCAGCGAACAATTCCGCCGCTTTGACGCGCAAGACCTGCGGTTTGGGCAGTTGTTGGAGCTGACACTGC TCAATGCGCCCGCAGCCTTTAGCGAGTTCCTGCCGCTCATCATGATCCTGACCACGATTGTGCTTTTTGTCGGCATGGCA CGCAGCAGCGAGCTGGTGGTCACACGCGCGATCGGGCGCTCGGGGATCCGGGCCCTCGTGCCGCCAGTGGTGGTGGCGCT GGTGCTGGGGGGGCTTGCGGTCAGCACGCTCAATCCCATCGTCGCGGCGACCACAAACCGGTTTGAGACCCTCTCGGAAA GCTACCGCCAGACCGGTGGCCCCGCCGCAGTTTCGCTGAGCGGAGAAGGCCTTTGGCTGCGTCAGGGGGGACAGAACGGA CAGTCGGTTATTCACGCTGCCAACTACCGGGGCGATGCCGAGAACCTCTATCTCTACGATGTTTCGATCCTGACCTACGC GCCCGATGGCGGCCCAACGCGGCGGACCGTTGCCGCCGAAGCGCGCCTTGAAGGCGATGATTGGGTGCTGCGCGATGCAA AAGTCTGGCAGCTGATCCTTGGTGTGAACCCCGAACGCAGCGCCAAACGCTATGACGAGCTGCGCCTGCCCACCACGCTC ACCAATGAGCGTATTCGCGACACGCTTGGCTATGCGGAGGGGATTTCGATTTATGACCTGCCCCAGACGATCCAGTCTCT CTCCGAGGCCGGGTTTTCAACCACCCGTTTCCAGGTCTGGCTGCAAGTCGAACTGGCACGCCCCCTGTTTCTGGTGGCAA TGGTGCTGGTGGGCGCTGCCTTTACCATGCGCCACACCCGCCTTGGCGGGACTGGCGTTGCCGTGCTGACCTCGGTTCTC CTGGGGTTTGCGCTTTACTTTGTCCATAATTTCGCGCGGATATTGGGCGAAAACGGGCAGATTCCGATCTTGCTGGCCGC CTGGGCGCCGCCGGTGGCCTCGATACTATTGACGATGGGATTGCTCCTGCATGCCGAAGACGGTTGA
Upstream 100 bases:
>100_bases CGACGTTGGGCGTGATGATTTCGGTTCTGTTTCTGCATCTGGCGACGCGGCCGCAGGCCCTGATGCGGCTCACGAGGCGC AAGACGCAGGAGACAGACGC
Downstream 100 bases:
>100_bases ATTGAAGAAACGGCGGCGAGGCGCGCTGCTGCGGACGGTGGTACCCCTGTGGTTGGCGCTTGCGGCAGCGCCCGCCCTGG CGCAAAACGCGACCTCTGCA
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Permease; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; Transmembrane Protein; Transporter YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; Permease Protein; Permease YjgP
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFSEFLPLIMILTTIVLFVGMA RSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIVAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNG QSVIHAANYRGDAENLYLYDVSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAAFTMRHTRLGGTGVAVLTSVL LGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMGLLLHAEDG
Sequences:
>Translated_368_residues MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFSEFLPLIMILTTIVLFVGMA RSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIVAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNG QSVIHAANYRGDAENLYLYDVSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAAFTMRHTRLGGTGVAVLTSVL LGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMGLLLHAEDG >Mature_368_residues MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFSEFLPLIMILTTIVLFVGMA RSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIVAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNG QSVIHAANYRGDAENLYLYDVSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAAFTMRHTRLGGTGVAVLTSVL LGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMGLLLHAEDG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082400, Length=374, Percent_Identity=23.7967914438503, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40367; Mature: 40367
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAF CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH SEFLPLIMILTTIVLFVGMARSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPI HHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH VAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLYLYD HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHEEECCCCCCCCEEEEEE VSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL EEEEEECCCCCCCCCEEEHHHEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCHH TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAA HHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHH FTMRHTRLGGTGVAVLTSVLLGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH LLLHAEDG HHHCCCCC >Mature Secondary Structure MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAF CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH SEFLPLIMILTTIVLFVGMARSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPI HHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH VAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLYLYD HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHEEECCCCCCCCEEEEEE VSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL EEEEEECCCCCCCCCEEEHHHEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCHH TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAA HHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHH FTMRHTRLGGTGVAVLTSVLLGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH LLLHAEDG HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA