Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yjgQ [C]

Identifier: 99080789

GI number: 99080789

Start: 1012011

End: 1013117

Strand: Reverse

Name: yjgQ [C]

Synonym: TM1040_0948

Alternate gene names: 99080789

Gene position: 1013117-1012011 (Counterclockwise)

Preceding gene: 99080790

Following gene: 99080788

Centisome position: 31.65

GC content: 61.25

Gene sequence:

>1107_bases
ATGATCCTTGATCTCTATTATGCCCGCCGCTTCTTGCAATGGTTCATGGTGATCGCCGCCGTCCTCATGAGTCTGGTGAT
GCTGATCGACCTCAGCGAACAATTCCGCCGCTTTGACGCGCAAGACCTGCGGTTTGGGCAGTTGTTGGAGCTGACACTGC
TCAATGCGCCCGCAGCCTTTAGCGAGTTCCTGCCGCTCATCATGATCCTGACCACGATTGTGCTTTTTGTCGGCATGGCA
CGCAGCAGCGAGCTGGTGGTCACACGCGCGATCGGGCGCTCGGGGATCCGGGCCCTCGTGCCGCCAGTGGTGGTGGCGCT
GGTGCTGGGGGGGCTTGCGGTCAGCACGCTCAATCCCATCGTCGCGGCGACCACAAACCGGTTTGAGACCCTCTCGGAAA
GCTACCGCCAGACCGGTGGCCCCGCCGCAGTTTCGCTGAGCGGAGAAGGCCTTTGGCTGCGTCAGGGGGGACAGAACGGA
CAGTCGGTTATTCACGCTGCCAACTACCGGGGCGATGCCGAGAACCTCTATCTCTACGATGTTTCGATCCTGACCTACGC
GCCCGATGGCGGCCCAACGCGGCGGACCGTTGCCGCCGAAGCGCGCCTTGAAGGCGATGATTGGGTGCTGCGCGATGCAA
AAGTCTGGCAGCTGATCCTTGGTGTGAACCCCGAACGCAGCGCCAAACGCTATGACGAGCTGCGCCTGCCCACCACGCTC
ACCAATGAGCGTATTCGCGACACGCTTGGCTATGCGGAGGGGATTTCGATTTATGACCTGCCCCAGACGATCCAGTCTCT
CTCCGAGGCCGGGTTTTCAACCACCCGTTTCCAGGTCTGGCTGCAAGTCGAACTGGCACGCCCCCTGTTTCTGGTGGCAA
TGGTGCTGGTGGGCGCTGCCTTTACCATGCGCCACACCCGCCTTGGCGGGACTGGCGTTGCCGTGCTGACCTCGGTTCTC
CTGGGGTTTGCGCTTTACTTTGTCCATAATTTCGCGCGGATATTGGGCGAAAACGGGCAGATTCCGATCTTGCTGGCCGC
CTGGGCGCCGCCGGTGGCCTCGATACTATTGACGATGGGATTGCTCCTGCATGCCGAAGACGGTTGA

Upstream 100 bases:

>100_bases
CGACGTTGGGCGTGATGATTTCGGTTCTGTTTCTGCATCTGGCGACGCGGCCGCAGGCCCTGATGCGGCTCACGAGGCGC
AAGACGCAGGAGACAGACGC

Downstream 100 bases:

>100_bases
ATTGAAGAAACGGCGGCGAGGCGCGCTGCTGCGGACGGTGGTACCCCTGTGGTTGGCGCTTGCGGCAGCGCCCGCCCTGG
CGCAAAACGCGACCTCTGCA

Product: permease YjgP/YjgQ

Products: NA

Alternate protein names: Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Permease; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; Transmembrane Protein; Transporter YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; Permease Protein; Permease YjgP

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFSEFLPLIMILTTIVLFVGMA
RSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIVAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNG
QSVIHAANYRGDAENLYLYDVSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL
TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAAFTMRHTRLGGTGVAVLTSVL
LGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMGLLLHAEDG

Sequences:

>Translated_368_residues
MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFSEFLPLIMILTTIVLFVGMA
RSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIVAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNG
QSVIHAANYRGDAENLYLYDVSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL
TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAAFTMRHTRLGGTGVAVLTSVL
LGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMGLLLHAEDG
>Mature_368_residues
MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFSEFLPLIMILTTIVLFVGMA
RSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIVAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNG
QSVIHAANYRGDAENLYLYDVSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL
TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAAFTMRHTRLGGTGVAVLTSVL
LGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMGLLLHAEDG

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082400, Length=374, Percent_Identity=23.7967914438503, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40367; Mature: 40367

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAF
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH
SEFLPLIMILTTIVLFVGMARSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPI
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
VAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLYLYD
HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHEEECCCCCCCCEEEEEE
VSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL
EEEEEECCCCCCCCCEEEHHHEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAA
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHH
FTMRHTRLGGTGVAVLTSVLLGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH
LLLHAEDG
HHHCCCCC
>Mature Secondary Structure
MILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAF
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH
SEFLPLIMILTTIVLFVGMARSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPI
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
VAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLYLYD
HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHEEECCCCCCCCEEEEEE
VSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL
EEEEEECCCCCCCCCEEEHHHEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
TNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAA
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHH
FTMRHTRLGGTGVAVLTSVLLGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTMG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH
LLLHAEDG
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA