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The map label for this gene is 99080793

Identifier: 99080793

GI number: 99080793

Start: 1016672

End: 1017253

Strand: Reverse

Name: 99080793

Synonym: TM1040_0952

Alternate gene names: NA

Gene position: 1017253-1016672 (Counterclockwise)

Preceding gene: 99080794

Following gene: 99080790

Centisome position: 31.78

GC content: 57.56

Gene sequence:

>582_bases
ATGAATTCAGACGATATTGGCCAGCTGATCTATCTGGTGCTGCTGCTTCTGGTGGTGGGCTCCTGGGTCTTTGTGCAAAA
CCGCCAGAGCCTTGGAAAAACCGCACAACAACTCATGATCTGGGCCCTGATCTTTCTGGGCGTGATTGCGGCCTATGGGC
TTTGGGATGACATCCGAACAACGGTGGTGCCACAGCAGGCAGTTCTTTCGGACGACGGCCAGATCCGCGTCCCCCGTGCC
CGCGATGGTCACTATTACCTCACTTTGCAGGTCAATGATCAGCCGGTTCAATTCCTGGTCGATACCGGTGCCAGCGATAT
GGTGCTCAATGCCGACACCGCTGAGCGCCTCGGGATCGATCCCAGTGCGCTGAGCTACTTTGGACGCGCCATGACGGCAA
ATGGCGAAGTACGCACCGCGCGCGTGACTCTCGATACCGTTGCCTTGGGGCCGATCACGGATCGCGATGTGTCGGCCTGG
GTCAACGAGGGCGCGTTGGCGCAGTCTCTCCTGGGAATGGGATATCTTCAGCGGTTCTCGGGGTTTGAAATTCGCAACAA
TGAACTGATCCTGACCCGTTGA

Upstream 100 bases:

>100_bases
TCTGTGCAATTTGTCCTCGACGGGCTGAGCGCTTTTGGTTTTGCCAGCTAGACAGAGCCGCCGCCCGCACCTACCTCCTT
GTGACGGAGGATGTTGATCC

Downstream 100 bases:

>100_bases
GAACGCGCCTTGGGGCGCGTGCCTCCGGCGGGGATATTTTGGGTTAGAAGAAGCAAAACCTGCTGCACAGACGCCGCGCG
CCGCTGCAGCAGGCCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNSDDIGQLIYLVLLLLVVGSWVFVQNRQSLGKTAQQLMIWALIFLGVIAAYGLWDDIRTTVVPQQAVLSDDGQIRVPRA
RDGHYYLTLQVNDQPVQFLVDTGASDMVLNADTAERLGIDPSALSYFGRAMTANGEVRTARVTLDTVALGPITDRDVSAW
VNEGALAQSLLGMGYLQRFSGFEIRNNELILTR

Sequences:

>Translated_193_residues
MNSDDIGQLIYLVLLLLVVGSWVFVQNRQSLGKTAQQLMIWALIFLGVIAAYGLWDDIRTTVVPQQAVLSDDGQIRVPRA
RDGHYYLTLQVNDQPVQFLVDTGASDMVLNADTAERLGIDPSALSYFGRAMTANGEVRTARVTLDTVALGPITDRDVSAW
VNEGALAQSLLGMGYLQRFSGFEIRNNELILTR
>Mature_193_residues
MNSDDIGQLIYLVLLLLVVGSWVFVQNRQSLGKTAQQLMIWALIFLGVIAAYGLWDDIRTTVVPQQAVLSDDGQIRVPRA
RDGHYYLTLQVNDQPVQFLVDTGASDMVLNADTAERLGIDPSALSYFGRAMTANGEVRTARVTLDTVALGPITDRDVSAW
VNEGALAQSLLGMGYLQRFSGFEIRNNELILTR

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018061
- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: PF00077 RVP [H]

EC number: NA

Molecular weight: Translated: 21289; Mature: 21289

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDDIGQLIYLVLLLLVVGSWVFVQNRQSLGKTAQQLMIWALIFLGVIAAYGLWDDIRT
CCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TVVPQQAVLSDDGQIRVPRARDGHYYLTLQVNDQPVQFLVDTGASDMVLNADTAERLGID
HHCCCHHHHCCCCCEEECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEECCCHHHHCCC
PSALSYFGRAMTANGEVRTARVTLDTVALGPITDRDVSAWVNEGALAQSLLGMGYLQRFS
HHHHHHHHHHEECCCCEEEEEEEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHC
GFEIRNNELILTR
CCEEECCEEEEEC
>Mature Secondary Structure
MNSDDIGQLIYLVLLLLVVGSWVFVQNRQSLGKTAQQLMIWALIFLGVIAAYGLWDDIRT
CCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TVVPQQAVLSDDGQIRVPRARDGHYYLTLQVNDQPVQFLVDTGASDMVLNADTAERLGID
HHCCCHHHHCCCCCEEECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEECCCHHHHCCC
PSALSYFGRAMTANGEVRTARVTLDTVALGPITDRDVSAWVNEGALAQSLLGMGYLQRFS
HHHHHHHHHHEECCCCEEEEEEEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHC
GFEIRNNELILTR
CCEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]