Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080739

Identifier: 99080739

GI number: 99080739

Start: 959238

End: 959534

Strand: Reverse

Name: 99080739

Synonym: TM1040_0898

Alternate gene names: NA

Gene position: 959534-959238 (Counterclockwise)

Preceding gene: 99080742

Following gene: 99080738

Centisome position: 29.98

GC content: 46.8

Gene sequence:

>297_bases
ATGGGTTGCATCCCCTACCAGCGCATCGGTGGCGGCTTCGGAAATACATGTGGAACTGTAAAGCGATATCTGAGCACCTG
CGTGCTTTTGATCGAAACAGGTGGAGCTGACGAGACCCACGCTTTCACCGGCAAATGCACCTGTATTTTCTGCAATATCG
GCAACGGTTTTCTTCAGAGCGCTCACGGGACTTCTCCTTCATTCAAAGTAATAGACACCCAAAACCTGCCACCTGAAAAA
AATAAAACAAGAGAATTCCAACACCATGCGGATAAAAACGCATTCACTCTTCATTAA

Upstream 100 bases:

>100_bases
TTAAATTGATCTTCGGCAACCCAACACAATTGGGTCACCGAAACGCATTTCAATCGAGACGGAGTAAAACTCAGCTCTCA
ATGCAGGTCGAAGAGACCAT

Downstream 100 bases:

>100_bases
TTTTTATTAACATCTAATTGATTCAAAAATGCAATTTCAGTTACCCACAATATTTGCACAGGTTTATTCACACGCGCAGT
ATTGCAAAGCGAAATGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MGCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQSAHGTSPSFKVIDTQNLPPEK
NKTREFQHHADKNAFTLH

Sequences:

>Translated_98_residues
MGCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQSAHGTSPSFKVIDTQNLPPEK
NKTREFQHHADKNAFTLH
>Mature_97_residues
GCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQSAHGTSPSFKVIDTQNLPPEKN
KTREFQHHADKNAFTLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10651; Mature: 10520

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQS
CCCCCCHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCCEEECCCEEEEEEECCCCHHCC
AHGTSPSFKVIDTQNLPPEKNKTREFQHHADKNAFTLH
CCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEECC
>Mature Secondary Structure 
GCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQS
CCCCCHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCCEEECCCEEEEEEECCCCHHCC
AHGTSPSFKVIDTQNLPPEKNKTREFQHHADKNAFTLH
CCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA