Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080734

Identifier: 99080734

GI number: 99080734

Start: 953503

End: 954951

Strand: Reverse

Name: 99080734

Synonym: TM1040_0893

Alternate gene names: NA

Gene position: 954951-953503 (Counterclockwise)

Preceding gene: 99080735

Following gene: 99080733

Centisome position: 29.83

GC content: 68.12

Gene sequence:

>1449_bases
TTGCCAAGGCGGACCAGAGACGTGCATGTGACCTTTTCTTCCCCCTGGGGCGCGCTCGAACGCGTCTTGCCTTCGCTCCG
GGCGCTGCGCCTCAAGACGGTTTTTCTGGGCTGCGCGCTCCTGCTGGCCTGCACCCCCGCCGAGACGCCGCCCTCGCGCG
CGTCGGCCTCACTGGCGATGGACCTGCCCCCCATCCGCACCTTTGCCACCCGCGCGGCTTCGCCGCCGCTGCGCTCCAAT
GCGGATATGGCGCGGGATTTTCTCGATCTGCATTTTCGTCTTGAGGGCGGCACCACCATGCCGGTCTTCACCCGTTTCGA
AGGCCCGGTGAGCGTCGCGGTCACCGGCACCGCCCCCGCCACGCTGCGCATGGATCTTGAGGCACTGCTGACGCGCCTGC
GCCGCGAGGCCGGGATCAACGTCCGCCTGCGCACGCAAGGCGAGGTGCCCGCCTCCGTGACCATCGAGGCCGTGAGCCGC
GCGCGCATTCAACGTCTTTTGCCGCATGCCGCCTGTTTCGTGGTACCAAATGTCAGCTCGATCGAGGAATACCGCCGCGC
GCGCCGCCTGCCGCAAACCGACTGGAAAAACCTGCGCAACCGCGAGCGGCTGGCGATCTTTGTGCCCAATGATGTGAACC
CGCAAGAGCTGCGCGACTGCCTGCACGAGGAACTGGCGCAGGCGCTGGGGCCGCTCAATGACCTCTATCGCCTGCGAGAT
TCGGTCTTTAACGACGACAATGTACATGCGGTGCTGACCGGCTTTGACATGCTGATGCTGCGCGCAACCTACGACCCCTC
CCTCAAAACCGGCATGACTCGCGAAGAGGTCGCCGCGCGCCTGCCCGCGATCCTTTCGCGGCTCAACCCTGCCGGCGCCC
GCCGCGCCCCAGCCCCGCTGCCCCAGACCCCCAGCGCCTGGACTTCGGCGGTCGAGACTGCGCTCGGTGGCTCCGCAACA
CGCGCCCAGCGCGTGCGCGCCGCCCATACGGCTGCCCATATCGCCGAGGCGCAGGGCTGGCAGGATCACCGCCGCGCCTT
TGGGCATTTCCTGATCGGGCGGACGCTGGAAACATCTGCCCCCGAGCAGGCCGAAGCGCATTTTCGCACCGCGCTCAATT
ACCTCGGCACCGGGCCGGACACCGCGCCGCATCGCGCCCTCAACCAGTCCCGCCTTGCTGCCTATGCGCTGCGCGCGGGC
AATATCGCGCGCGCCGAACAGTTGATCGATACCGCCTATGGCGCTGCGCAAACCAGCCAGAACGCCGCCCTGATGGCCAC
GCTTTTGACCCTGAAGGCGCATATCGCCGAGAGCCGCGGCGACCGTCGCCGCGCGACCGCCCTGCGCGCAGAGAGTGCCG
GATGGGCACTCTATGGCAATGGTCCGGGCGCGGTCATCGCGATGACGCCGCGTGAGGTTGCCGCAGCCGGTCCTTCCCGG
CGTCGCTGA

Upstream 100 bases:

>100_bases
GCACACCGGCCCTATCTGCCATCAAAATCGGACCCGACTTCAAATTTTTGCCCAAATCATGTTCATACTGGGTGTCTTGG
CCGGGAGATGATCCCGGATC

Downstream 100 bases:

>100_bases
CCTTTGCACCTGCGCCAAAGCCGGGCTATATCCACGCCAAAGCCCCACCGGTCGTTCGTGTCGCCTATCGCAGACCCGGA
CACCCCGAATTTTGGACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MPRRTRDVHVTFSSPWGALERVLPSLRALRLKTVFLGCALLLACTPAETPPSRASASLAMDLPPIRTFATRAASPPLRSN
ADMARDFLDLHFRLEGGTTMPVFTRFEGPVSVAVTGTAPATLRMDLEALLTRLRREAGINVRLRTQGEVPASVTIEAVSR
ARIQRLLPHAACFVVPNVSSIEEYRRARRLPQTDWKNLRNRERLAIFVPNDVNPQELRDCLHEELAQALGPLNDLYRLRD
SVFNDDNVHAVLTGFDMLMLRATYDPSLKTGMTREEVAARLPAILSRLNPAGARRAPAPLPQTPSAWTSAVETALGGSAT
RAQRVRAAHTAAHIAEAQGWQDHRRAFGHFLIGRTLETSAPEQAEAHFRTALNYLGTGPDTAPHRALNQSRLAAYALRAG
NIARAEQLIDTAYGAAQTSQNAALMATLLTLKAHIAESRGDRRRATALRAESAGWALYGNGPGAVIAMTPREVAAAGPSR
RR

Sequences:

>Translated_482_residues
MPRRTRDVHVTFSSPWGALERVLPSLRALRLKTVFLGCALLLACTPAETPPSRASASLAMDLPPIRTFATRAASPPLRSN
ADMARDFLDLHFRLEGGTTMPVFTRFEGPVSVAVTGTAPATLRMDLEALLTRLRREAGINVRLRTQGEVPASVTIEAVSR
ARIQRLLPHAACFVVPNVSSIEEYRRARRLPQTDWKNLRNRERLAIFVPNDVNPQELRDCLHEELAQALGPLNDLYRLRD
SVFNDDNVHAVLTGFDMLMLRATYDPSLKTGMTREEVAARLPAILSRLNPAGARRAPAPLPQTPSAWTSAVETALGGSAT
RAQRVRAAHTAAHIAEAQGWQDHRRAFGHFLIGRTLETSAPEQAEAHFRTALNYLGTGPDTAPHRALNQSRLAAYALRAG
NIARAEQLIDTAYGAAQTSQNAALMATLLTLKAHIAESRGDRRRATALRAESAGWALYGNGPGAVIAMTPREVAAAGPSR
RR
>Mature_481_residues
PRRTRDVHVTFSSPWGALERVLPSLRALRLKTVFLGCALLLACTPAETPPSRASASLAMDLPPIRTFATRAASPPLRSNA
DMARDFLDLHFRLEGGTTMPVFTRFEGPVSVAVTGTAPATLRMDLEALLTRLRREAGINVRLRTQGEVPASVTIEAVSRA
RIQRLLPHAACFVVPNVSSIEEYRRARRLPQTDWKNLRNRERLAIFVPNDVNPQELRDCLHEELAQALGPLNDLYRLRDS
VFNDDNVHAVLTGFDMLMLRATYDPSLKTGMTREEVAARLPAILSRLNPAGARRAPAPLPQTPSAWTSAVETALGGSATR
AQRVRAAHTAAHIAEAQGWQDHRRAFGHFLIGRTLETSAPEQAEAHFRTALNYLGTGPDTAPHRALNQSRLAAYALRAGN
IARAEQLIDTAYGAAQTSQNAALMATLLTLKAHIAESRGDRRRATALRAESAGWALYGNGPGAVIAMTPREVAAAGPSRR
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52622; Mature: 52491

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRTRDVHVTFSSPWGALERVLPSLRALRLKTVFLGCALLLACTPAETPPSRASASLAM
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
DLPPIRTFATRAASPPLRSNADMARDFLDLHFRLEGGTTMPVFTRFEGPVSVAVTGTAPA
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEECCCCEEEEEECCCCC
TLRMDLEALLTRLRREAGINVRLRTQGEVPASVTIEAVSRARIQRLLPHAACFVVPNVSS
EEHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCHHH
IEEYRRARRLPQTDWKNLRNRERLAIFVPNDVNPQELRDCLHEELAQALGPLNDLYRLRD
HHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
SVFNDDNVHAVLTGFDMLMLRATYDPSLKTGMTREEVAARLPAILSRLNPAGARRAPAPL
HHCCCCCCEEEEHHHHHHHHEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PQTPSAWTSAVETALGGSATRAQRVRAAHTAAHIAEAQGWQDHRRAFGHFLIGRTLETSA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
PEQAEAHFRTALNYLGTGPDTAPHRALNQSRLAAYALRAGNIARAEQLIDTAYGAAQTSQ
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCC
NAALMATLLTLKAHIAESRGDRRRATALRAESAGWALYGNGPGAVIAMTPREVAAAGPSR
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHCCCCC
RR
CC
>Mature Secondary Structure 
PRRTRDVHVTFSSPWGALERVLPSLRALRLKTVFLGCALLLACTPAETPPSRASASLAM
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
DLPPIRTFATRAASPPLRSNADMARDFLDLHFRLEGGTTMPVFTRFEGPVSVAVTGTAPA
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEECCCCEEEEEECCCCC
TLRMDLEALLTRLRREAGINVRLRTQGEVPASVTIEAVSRARIQRLLPHAACFVVPNVSS
EEHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCHHH
IEEYRRARRLPQTDWKNLRNRERLAIFVPNDVNPQELRDCLHEELAQALGPLNDLYRLRD
HHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
SVFNDDNVHAVLTGFDMLMLRATYDPSLKTGMTREEVAARLPAILSRLNPAGARRAPAPL
HHCCCCCCEEEEHHHHHHHHEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PQTPSAWTSAVETALGGSATRAQRVRAAHTAAHIAEAQGWQDHRRAFGHFLIGRTLETSA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
PEQAEAHFRTALNYLGTGPDTAPHRALNQSRLAAYALRAGNIARAEQLIDTAYGAAQTSQ
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCC
NAALMATLLTLKAHIAESRGDRRRATALRAESAGWALYGNGPGAVIAMTPREVAAAGPSR
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHCCCCC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA