Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is ate
Identifier: 99080723
GI number: 99080723
Start: 941881
End: 942705
Strand: Reverse
Name: ate
Synonym: TM1040_0882
Alternate gene names: 99080723
Gene position: 942705-941881 (Counterclockwise)
Preceding gene: 99080724
Following gene: 99080722
Centisome position: 29.45
GC content: 61.21
Gene sequence:
>825_bases ATGCGCCACACTCTACCGATCGCTCCTCAGTTCTATGTGACTGCGCCGCAGCCCTGCCCCTACCTTGAGGGCCGGATGGA GCGCAAACTGTTCACCTCGCTGCAGGGCGACGGTGTGGAGCAGCTGAACAACTCGCTCAGCCAGCAGGGCTTTCGGCGCT CGCAGAATGTGCTCTACCGTCCTTCCTGTTCCGACTGCTCGGCCTGCATGTCCGCACGCATCAGCGTTGCCGACTTCAAA CCGACCCGCAGCCAGCGCAAGACGCTCAATCGCAACCGCCACCTGGACCGGCGCGCCACCTCGCCCTGGGCGACCGAGGA TCAATACGCGCTGTTTCGAGACTATCTCGACCAGCGCCACGCCGACGGTGGCATGGCGGACATGGATGTCTTTGAATATG CCGCCATGGTCGAGGAAACCCCGATCCGGACGCGGGTGGTGGAATACACCGACTTGGACACCAATGCGCTCACCGCTGTT TCACTCACCGATGTGCTCGAAGACGGGCTGAGCATGGTCTATTCCTTCTATGCGCCCAACCTGCCGCAGAACTCGCTCGG CACCTTCATGGTGCTTGATCACATCGAGATCGCGCGCGAGGCCGGGCTGCCCTATGTTTACCTGGGCTACTGGGTCCCTG GCAGTCAGAAGATGGGGTACAAGGCCAAGTTCTCCGGCCTTGAAGTCTATTTCGGCGGCGAATGGACTCCCTTGAAGGAC CCCGAAAGCTTTACCGCCGAGGATCACCCTCTCTCTACCGCGCCGGTGGCCGAGCAGGTGGCCAATATCCAGCTGCCGCA GGGTACCTCCCCCAAAAAAAGGTAA
Upstream 100 bases:
>100_bases ACCGGGTCGGTCGCTATCATCACATATTCAACGACACTGATGCCGGGCCGTCCAAGAGGGACGGTCCTTCCTACGTTTAC GAGAGCCGCTGACCTCACAT
Downstream 100 bases:
>100_bases ACCGCGTGCAATTTCTCCACGCCGTCTCCCTTGTGGTGCCCGATTACGACGCGGCCATTGCGTTTTACTGCCAGACACTT GGCTGGACCCTGGCCGAAGA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYRPSCSDCSACMSARISVADFK PTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRHADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAV SLTDVLEDGLSMVYSFYAPNLPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR
Sequences:
>Translated_274_residues MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYRPSCSDCSACMSARISVADFK PTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRHADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAV SLTDVLEDGLSMVYSFYAPNLPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR >Mature_274_residues MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYRPSCSDCSACMSARISVADFK PTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRHADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAV SLTDVLEDGLSMVYSFYAPNLPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_SILST (Q1GIA1)
Other databases:
- EMBL: CP000377 - RefSeq: YP_612877.1 - STRING: Q1GIA1 - GeneID: 4075979 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_0882 - NMPDR: fig|292414.1.peg.2966 - eggNOG: COG2935 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: SSP292414:TM1040_0882-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 30928; Mature: 30928
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEC PSCSDCSACMSARISVADFKPTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRH CCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHC ADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAVSLTDVLEDGLSMVYSFYAPN CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD CCCCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCC PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEC PSCSDCSACMSARISVADFKPTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRH CCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHC ADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAVSLTDVLEDGLSMVYSFYAPN CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD CCCCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCC PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA