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The map label for this gene is yfdZ [C]

Identifier: 99080706

GI number: 99080706

Start: 919373

End: 920518

Strand: Direct

Name: yfdZ [C]

Synonym: TM1040_0865

Alternate gene names: 99080706

Gene position: 919373-920518 (Clockwise)

Preceding gene: 99080703

Following gene: 99080707

Centisome position: 28.72

GC content: 63.26

Gene sequence:

>1146_bases
ATGCGAAACTCAAGCCGGTCCAAGGTCGATCCCTTCATTGTGATGGATGTGATGGAGGCCGCCCGCAAGGCGGAAGAGCA
GGGCCGTCATATCATCCATATGGAAGTGGGCCAGCCCTCCACGGGCGCGCCCGAGGCCGCACGGCGGGCCCTTGCCGATG
CGCTCGAGAGAGATTCCATGGGATATACTGTCGCGCTGGGTTTGCCCGCGCTGCGCAAACGCATCGCCGCGCTTTACGGG
GAGTGGTACAACGTCGACCTCAACCCCGAGCGCGTAGTGATCACGCCCGGCTCTTCGGGGGCGTTCATCCTGAGTTTCAC
CGCGCTTTTTGACAGCGGGGACCGCGTGGGCATCGGCGCGCCGGGCTATCCTTCCTATCGCCAGATCCTGAGCGCCCTGG
GCATGCAGCCCGTGGATATCCAGACCGCGCCCGAGCACCGCCTGCAGCCGGTCGCCGCCGACATTCGCGACCAGAACCTT
GCCGGTCTCATGGTGGCAAGCCCCGCCAACCCCACCGGGACAATGCTCGACAAACCGGCGCTCTCGGCGCTGATGGAGGC
GGCGCAGGCCGAGGGCGCGAGTTTTATTTCCGACGAGATCTACCACGGCATCGAATATGAGGCCAAAGCGGTCACCGCGC
TTGAGATTTCGGATGAATGCTATGTCATCAACTCCTTTTCCAAGTATTTCTCGATGACCGGCTGGCGCGTGGGCTGGATG
GTGGTTCCCGAGGATCACATCCGCACGGTGGAGCGGATCGCTCAGAACATGTTTATCTGCGCACCCCATGCCAGTCAGGT
GGCGGCGCTGGCCGCAATGGATTGCCGCGATGAGCTGGAAGCGAACCTCGCGGTCTATGCCCGGAACCGCGCCCTGATGC
TCGAGGGGTTGCCGAAGGCAGGGTTTAGCAAGATCGCACCTCCGGATGGGGCGTTTTATGTCTATGCGGATGTGTCGGAC
CTCACGCAGGACAGTCGCGCCTTTGCAGCGGAAATTCTCGAAAAAGCCGGGGTGGCGGTCACACCGGGGCTCGATTTTGA
CCCAGTGCGCGGGGCCACCACGTTGCGATTTTCCTATGCCCGCTCCACCGCCGACATCGAGGAGGGGCTGGCGCGCCTCA
GGGCCTTTATGGAGGCGCGGGGCTGA

Upstream 100 bases:

>100_bases
GCCCACCGCTGCGGCCAGAAGACGAAACAGACGTGCGCACGGGATTGACGCCAGAGAGAATACGCGCTCAAAACTCATGG
CCGCACCATGGGAGATCAAC

Downstream 100 bases:

>100_bases
TGCGCGCGCTTTTTGCAAAGCTCTGGCTGTGCCTTACGCTGGTCCATCTGGCGTTGCTGCCTGCTGCCGCCGCGGCGCAG
GGGTTTTCGGCGCTCGCGCG

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRNSSRSKVDPFIVMDVMEAARKAEEQGRHIIHMEVGQPSTGAPEAARRALADALERDSMGYTVALGLPALRKRIAALYG
EWYNVDLNPERVVITPGSSGAFILSFTALFDSGDRVGIGAPGYPSYRQILSALGMQPVDIQTAPEHRLQPVAADIRDQNL
AGLMVASPANPTGTMLDKPALSALMEAAQAEGASFISDEIYHGIEYEAKAVTALEISDECYVINSFSKYFSMTGWRVGWM
VVPEDHIRTVERIAQNMFICAPHASQVAALAAMDCRDELEANLAVYARNRALMLEGLPKAGFSKIAPPDGAFYVYADVSD
LTQDSRAFAAEILEKAGVAVTPGLDFDPVRGATTLRFSYARSTADIEEGLARLRAFMEARG

Sequences:

>Translated_381_residues
MRNSSRSKVDPFIVMDVMEAARKAEEQGRHIIHMEVGQPSTGAPEAARRALADALERDSMGYTVALGLPALRKRIAALYG
EWYNVDLNPERVVITPGSSGAFILSFTALFDSGDRVGIGAPGYPSYRQILSALGMQPVDIQTAPEHRLQPVAADIRDQNL
AGLMVASPANPTGTMLDKPALSALMEAAQAEGASFISDEIYHGIEYEAKAVTALEISDECYVINSFSKYFSMTGWRVGWM
VVPEDHIRTVERIAQNMFICAPHASQVAALAAMDCRDELEANLAVYARNRALMLEGLPKAGFSKIAPPDGAFYVYADVSD
LTQDSRAFAAEILEKAGVAVTPGLDFDPVRGATTLRFSYARSTADIEEGLARLRAFMEARG
>Mature_381_residues
MRNSSRSKVDPFIVMDVMEAARKAEEQGRHIIHMEVGQPSTGAPEAARRALADALERDSMGYTVALGLPALRKRIAALYG
EWYNVDLNPERVVITPGSSGAFILSFTALFDSGDRVGIGAPGYPSYRQILSALGMQPVDIQTAPEHRLQPVAADIRDQNL
AGLMVASPANPTGTMLDKPALSALMEAAQAEGASFISDEIYHGIEYEAKAVTALEISDECYVINSFSKYFSMTGWRVGWM
VVPEDHIRTVERIAQNMFICAPHASQVAALAAMDCRDELEANLAVYARNRALMLEGLPKAGFSKIAPPDGAFYVYADVSD
LTQDSRAFAAEILEKAGVAVTPGLDFDPVRGATTLRFSYARSTADIEEGLARLRAFMEARG

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=390, Percent_Identity=24.3589743589744, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI169881279, Length=390, Percent_Identity=24.3589743589744, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI56713256, Length=321, Percent_Identity=26.1682242990654, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI56713254, Length=321, Percent_Identity=26.1682242990654, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI4507369, Length=327, Percent_Identity=22.3241590214067, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI169881281, Length=307, Percent_Identity=21.1726384364821, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1788722, Length=393, Percent_Identity=25.1908396946565, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1788627, Length=389, Percent_Identity=26.2210796915167, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786816, Length=371, Percent_Identity=26.6846361185984, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1790797, Length=238, Percent_Identity=24.3697478991597, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567663, Length=401, Percent_Identity=23.6907730673317, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71994476, Length=390, Percent_Identity=22.8205128205128, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71994472, Length=390, Percent_Identity=22.8205128205128, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17567369, Length=305, Percent_Identity=23.9344262295082, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322401, Length=388, Percent_Identity=22.1649484536082, Blast_Score=86, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28573069, Length=317, Percent_Identity=23.0283911671924, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24646114, Length=317, Percent_Identity=23.0283911671924, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28573067, Length=317, Percent_Identity=23.0283911671924, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28573065, Length=317, Percent_Identity=23.0283911671924, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI18859735, Length=388, Percent_Identity=22.680412371134, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI45551451, Length=391, Percent_Identity=24.0409207161125, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641770, Length=391, Percent_Identity=24.0409207161125, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641760, Length=391, Percent_Identity=24.0409207161125, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641768, Length=391, Percent_Identity=24.0409207161125, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641766, Length=391, Percent_Identity=24.0409207161125, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641764, Length=391, Percent_Identity=24.0409207161125, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41315; Mature: 41315

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSSRSKVDPFIVMDVMEAARKAEEQGRHIIHMEVGQPSTGAPEAARRALADALERDSM
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
GYTVALGLPALRKRIAALYGEWYNVDLNPERVVITPGSSGAFILSFTALFDSGDRVGIGA
CEEEEECCHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEEEEHHCCCCEEECCC
PGYPSYRQILSALGMQPVDIQTAPEHRLQPVAADIRDQNLAGLMVASPANPTGTMLDKPA
CCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCCHHH
LSALMEAAQAEGASFISDEIYHGIEYEAKAVTALEISDECYVINSFSKYFSMTGWRVGWM
HHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECHHHHHHCCCCEEEEE
VVPEDHIRTVERIAQNMFICAPHASQVAALAAMDCRDELEANLAVYARNRALMLEGLPKA
ECCHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCC
GFSKIAPPDGAFYVYADVSDLTQDSRAFAAEILEKAGVAVTPGLDFDPVRGATTLRFSYA
CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEHH
RSTADIEEGLARLRAFMEARG
CCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNSSRSKVDPFIVMDVMEAARKAEEQGRHIIHMEVGQPSTGAPEAARRALADALERDSM
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
GYTVALGLPALRKRIAALYGEWYNVDLNPERVVITPGSSGAFILSFTALFDSGDRVGIGA
CEEEEECCHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEEEEHHCCCCEEECCC
PGYPSYRQILSALGMQPVDIQTAPEHRLQPVAADIRDQNLAGLMVASPANPTGTMLDKPA
CCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCCHHH
LSALMEAAQAEGASFISDEIYHGIEYEAKAVTALEISDECYVINSFSKYFSMTGWRVGWM
HHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECHHHHHHCCCCEEEEE
VVPEDHIRTVERIAQNMFICAPHASQVAALAAMDCRDELEANLAVYARNRALMLEGLPKA
ECCHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCC
GFSKIAPPDGAFYVYADVSDLTQDSRAFAAEILEKAGVAVTPGLDFDPVRGATTLRFSYA
CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEHH
RSTADIEEGLARLRAFMEARG
CCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]