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The map label for this gene is ytcJ [H]

Identifier: 99080675

GI number: 99080675

Start: 878016

End: 879683

Strand: Reverse

Name: ytcJ [H]

Synonym: TM1040_0834

Alternate gene names: 99080675

Gene position: 879683-878016 (Counterclockwise)

Preceding gene: 99080676

Following gene: 99080672

Centisome position: 27.48

GC content: 61.93

Gene sequence:

>1668_bases
ATGACCATCCCTCCTCAGACCGTGATCCTGAACGGTCGCCTGATCACCTTTGACCCCAAAAGCCCCTTTGCCGAGGCGCT
CGCCATCACCGACGGGCTGATCTCTGCGGTGGGCACCACCGCCGAAATCCGCGCTCTTTCCGCGCCCTCCACTCGCGTGA
TTGACGCCGCCGGGAGCACCGTGTTGCCGGGATTTATCGACAGCCATGTGCATCTCTTTGGCGGCTCAGTCGAACTCGCG
TGCCTGGATCTCACGGGTGTTCAGGGGGAGACAGAACTGACCGAGGTCGTGCGCGAATGGGCCGCCAAGAACACCGAAGA
TCGGCTCGTCTTTGCGGTTCAGGCCGATTACGCCATTCTGGGTGAAGGTATCAAAACCACCCGTCAGGCGCTGGATCGCG
TTTTGCCCGATCGTCCCTTTGCCATGTATGCGCCCGATCATCACACGGTCTGGGCCAATACCGCCGCGCTGGAGGCCGCA
GGGCTTCTTCATGGTGCAGAGGTCGAAGCGGGGGCGCAAGTGGTGATGGGCACCGATGGCCGCGCGACGGGCGAACTGCA
GGAGCCTTCCGCCTATGCGCCGGTGCTGCGCATGACCCGCCACGCAGGTCGGGACATGATGGGGCTGGTAACGGGGGCCG
ACCCGGTACCAGCAGCCACGCCCGCCGAACGCGCGCTAGACAAGGCAGCTTTGGAACGTGGCCTCAAACACTGCGCCAGC
CACGGCATCACCGGGTTGCACAATATGGATGGCAATTTCTATCAGCTCGAACTGCTCTCCGAGATGGAGCGGGACGGCAC
GCTCTTATGCCGTACCGAAGTACCTTTTCACTACAAGAGCCCAGATCCGCTCGACCGGTTTTCCGAAGCGCAAGACATGC
GCCAACGCTTCAACAGCGATATGGTCTGGTGCAATCGGGTAAAGATGTTCATGGATGGCGTTGTTGAGAGCGGCACCGCC
CTGATGCTGCGCCCCTACCCCGGCACCGATCATATCGGCGACGCGGTGTTTGAGCCGGAGCACTTCAACGAAGCCTGCAT
CCGCGCCGACGCCTTGGGGCTGCAGATTGCCACTCATGCGATTGGCGATCTGGCCGTGCGCCGCACACTCGATGGCTATG
AGGCTGCCCAGCGCAGCAATGGCCAACGTGACAGTCGCCACCGGATCGAACACATCGAAGTGCTGCACCCCGACGATCTG
CCCCGTTTCAAGGCCCTGGGCGTCGTCGCCTCGATCCAACCGGGGCATGCACCCTTTGGAGGCTATTTCCCTCCATCGGG
CGTGGGGGCAATGCTGCACCCGGACCAGATCCCGCTCGCATACGCATGGCAGGACATCCGCAACAGCGGCGCAAAGGTCA
TTTTCTCGACCGACTGGCCCGTAATCCCCGTCGACGTGATGCCCACGATCAAGGGCGCGGTTGCGCCGCATTCGCTCGGT
GCCCCGTGGCGAGATCAATCACAGAGCCTGATGGATACGCTCGCCAGCTACACGGTCGAGAACGCATGGGTGGAATTCAA
TGAGGCCCGCAAGGGCATGTTGAAACCGGGTATGATGGCAGACATCGTGGTGATGGATCACAACCTTGAAGCCATGGATC
CCCAGTTGCTCGATCAGTCCCGCGCAGCCTTTACGATCTGTGGCGGTCGCCTGACCTGGGAGGCTTGA

Upstream 100 bases:

>100_bases
TCTGGACCGAAGTGACCAAATAACCCCGCAGAAGGGGCGTAACAGCCCCGGGGCGCGCCAAATCGGGGCGCGCCCCCACC
CCAAAACTGGACTCCGCGTG

Downstream 100 bases:

>100_bases
TTACCCCCGCAAACAGGTAAGAAAAGCCCCGAGCGTCAGAGCGACGTTCGGGGCTTTTACCTATCACTTCCAATGAGTTA
CTCGGCCGCCAAGGCGCTCG

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MTIPPQTVILNGRLITFDPKSPFAEALAITDGLISAVGTTAEIRALSAPSTRVIDAAGSTVLPGFIDSHVHLFGGSVELA
CLDLTGVQGETELTEVVREWAAKNTEDRLVFAVQADYAILGEGIKTTRQALDRVLPDRPFAMYAPDHHTVWANTAALEAA
GLLHGAEVEAGAQVVMGTDGRATGELQEPSAYAPVLRMTRHAGRDMMGLVTGADPVPAATPAERALDKAALERGLKHCAS
HGITGLHNMDGNFYQLELLSEMERDGTLLCRTEVPFHYKSPDPLDRFSEAQDMRQRFNSDMVWCNRVKMFMDGVVESGTA
LMLRPYPGTDHIGDAVFEPEHFNEACIRADALGLQIATHAIGDLAVRRTLDGYEAAQRSNGQRDSRHRIEHIEVLHPDDL
PRFKALGVVASIQPGHAPFGGYFPPSGVGAMLHPDQIPLAYAWQDIRNSGAKVIFSTDWPVIPVDVMPTIKGAVAPHSLG
APWRDQSQSLMDTLASYTVENAWVEFNEARKGMLKPGMMADIVVMDHNLEAMDPQLLDQSRAAFTICGGRLTWEA

Sequences:

>Translated_555_residues
MTIPPQTVILNGRLITFDPKSPFAEALAITDGLISAVGTTAEIRALSAPSTRVIDAAGSTVLPGFIDSHVHLFGGSVELA
CLDLTGVQGETELTEVVREWAAKNTEDRLVFAVQADYAILGEGIKTTRQALDRVLPDRPFAMYAPDHHTVWANTAALEAA
GLLHGAEVEAGAQVVMGTDGRATGELQEPSAYAPVLRMTRHAGRDMMGLVTGADPVPAATPAERALDKAALERGLKHCAS
HGITGLHNMDGNFYQLELLSEMERDGTLLCRTEVPFHYKSPDPLDRFSEAQDMRQRFNSDMVWCNRVKMFMDGVVESGTA
LMLRPYPGTDHIGDAVFEPEHFNEACIRADALGLQIATHAIGDLAVRRTLDGYEAAQRSNGQRDSRHRIEHIEVLHPDDL
PRFKALGVVASIQPGHAPFGGYFPPSGVGAMLHPDQIPLAYAWQDIRNSGAKVIFSTDWPVIPVDVMPTIKGAVAPHSLG
APWRDQSQSLMDTLASYTVENAWVEFNEARKGMLKPGMMADIVVMDHNLEAMDPQLLDQSRAAFTICGGRLTWEA
>Mature_554_residues
TIPPQTVILNGRLITFDPKSPFAEALAITDGLISAVGTTAEIRALSAPSTRVIDAAGSTVLPGFIDSHVHLFGGSVELAC
LDLTGVQGETELTEVVREWAAKNTEDRLVFAVQADYAILGEGIKTTRQALDRVLPDRPFAMYAPDHHTVWANTAALEAAG
LLHGAEVEAGAQVVMGTDGRATGELQEPSAYAPVLRMTRHAGRDMMGLVTGADPVPAATPAERALDKAALERGLKHCASH
GITGLHNMDGNFYQLELLSEMERDGTLLCRTEVPFHYKSPDPLDRFSEAQDMRQRFNSDMVWCNRVKMFMDGVVESGTAL
MLRPYPGTDHIGDAVFEPEHFNEACIRADALGLQIATHAIGDLAVRRTLDGYEAAQRSNGQRDSRHRIEHIEVLHPDDLP
RFKALGVVASIQPGHAPFGGYFPPSGVGAMLHPDQIPLAYAWQDIRNSGAKVIFSTDWPVIPVDVMPTIKGAVAPHSLGA
PWRDQSQSLMDTLASYTVENAWVEFNEARKGMLKPGMMADIVVMDHNLEAMDPQLLDQSRAAFTICGGRLTWEA

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 60322; Mature: 60191

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPPQTVILNGRLITFDPKSPFAEALAITDGLISAVGTTAEIRALSAPSTRVIDAAGST
CCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEEECCCCE
VLPGFIDSHVHLFGGSVELACLDLTGVQGETELTEVVREWAAKNTEDRLVFAVQADYAIL
ECCCHHCCCEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
GEGIKTTRQALDRVLPDRPFAMYAPDHHTVWANTAALEAAGLLHGAEVEAGAQVVMGTDG
CCCHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCEEEECCCC
RATGELQEPSAYAPVLRMTRHAGRDMMGLVTGADPVPAATPAERALDKAALERGLKHCAS
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HGITGLHNMDGNFYQLELLSEMERDGTLLCRTEVPFHYKSPDPLDRFSEAQDMRQRFNSD
CCCCEEECCCCCEEEEHHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCC
MVWCNRVKMFMDGVVESGTALMLRPYPGTDHIGDAVFEPEHFNEACIRADALGLQIATHA
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IGDLAVRRTLDGYEAAQRSNGQRDSRHRIEHIEVLHPDDLPRFKALGVVASIQPGHAPFG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCCCCHHHHCEEEECCCCCCCCC
GYFPPSGVGAMLHPDQIPLAYAWQDIRNSGAKVIFSTDWPVIPVDVMPTIKGAVAPHSLG
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCHHCCCCCCCCC
APWRDQSQSLMDTLASYTVENAWVEFNEARKGMLKPGMMADIVVMDHNLEAMDPQLLDQS
CCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHCCC
RAAFTICGGRLTWEA
CCEEEEECCEEEECC
>Mature Secondary Structure 
TIPPQTVILNGRLITFDPKSPFAEALAITDGLISAVGTTAEIRALSAPSTRVIDAAGST
CCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEEECCCCE
VLPGFIDSHVHLFGGSVELACLDLTGVQGETELTEVVREWAAKNTEDRLVFAVQADYAIL
ECCCHHCCCEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
GEGIKTTRQALDRVLPDRPFAMYAPDHHTVWANTAALEAAGLLHGAEVEAGAQVVMGTDG
CCCHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCEEEECCCC
RATGELQEPSAYAPVLRMTRHAGRDMMGLVTGADPVPAATPAERALDKAALERGLKHCAS
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HGITGLHNMDGNFYQLELLSEMERDGTLLCRTEVPFHYKSPDPLDRFSEAQDMRQRFNSD
CCCCEEECCCCCEEEEHHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCC
MVWCNRVKMFMDGVVESGTALMLRPYPGTDHIGDAVFEPEHFNEACIRADALGLQIATHA
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IGDLAVRRTLDGYEAAQRSNGQRDSRHRIEHIEVLHPDDLPRFKALGVVASIQPGHAPFG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCCCCHHHHCEEEECCCCCCCCC
GYFPPSGVGAMLHPDQIPLAYAWQDIRNSGAKVIFSTDWPVIPVDVMPTIKGAVAPHSLG
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCHHCCCCCCCCC
APWRDQSQSLMDTLASYTVENAWVEFNEARKGMLKPGMMADIVVMDHNLEAMDPQLLDQS
CCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHCCC
RAAFTICGGRLTWEA
CCEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]