Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080658

Identifier: 99080658

GI number: 99080658

Start: 858798

End: 859124

Strand: Reverse

Name: 99080658

Synonym: TM1040_0817

Alternate gene names: NA

Gene position: 859124-858798 (Counterclockwise)

Preceding gene: 99080659

Following gene: 99080657

Centisome position: 26.84

GC content: 50.46

Gene sequence:

>327_bases
ATGATGGATCGGGGCAATGTCGCATCACTATCCACCCTGCAGATTGACCAAATGGAAGAAAGGAAGCACGACACTGATTA
TCAGCTGTCGCTCTGCCGGAGCATGATGGAAGAAGACATGATTCTTCCCTTTGCCTTTCACCGTGCCGCCATTCTCCTAT
CGAAAGAGAAGAGATTTTCCGAGGCGCTTGATGTTTGTCTGTACGTCCAACGCTGGTGCGACAACGCCAAGAGCAATTGG
GATGGTGTATCCGCGCTTCACTGGGAAAGCCCGAAACTAAAAAACTGCATTGAACGCATCCCAAAGCTCATGGAGCGCGC
TCAGTAA

Upstream 100 bases:

>100_bases
ATCCGGTTGATTTGTCTTTCTGGGACACCACCTTGGAAGCGGTCTTTTCTGTCGCCACGGGTGTCAAAGTTCGCTACCAG
CCCAACACCACGGTAGACAC

Downstream 100 bases:

>100_bases
GCCCGGCCCCTTGAGGCCGAGCCGATTGACTTCCCATTTTGGGAACAAACCGCTTGACTGAAGGCCACTCCAGCGCTACA
TTCCCGATACGGGAACAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MMDRGNVASLSTLQIDQMEERKHDTDYQLSLCRSMMEEDMILPFAFHRAAILLSKEKRFSEALDVCLYVQRWCDNAKSNW
DGVSALHWESPKLKNCIERIPKLMERAQ

Sequences:

>Translated_108_residues
MMDRGNVASLSTLQIDQMEERKHDTDYQLSLCRSMMEEDMILPFAFHRAAILLSKEKRFSEALDVCLYVQRWCDNAKSNW
DGVSALHWESPKLKNCIERIPKLMERAQ
>Mature_108_residues
MMDRGNVASLSTLQIDQMEERKHDTDYQLSLCRSMMEEDMILPFAFHRAAILLSKEKRFSEALDVCLYVQRWCDNAKSNW
DGVSALHWESPKLKNCIERIPKLMERAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12694; Mature: 12694

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDRGNVASLSTLQIDQMEERKHDTDYQLSLCRSMMEEDMILPFAFHRAAILLSKEKRFS
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EALDVCLYVQRWCDNAKSNWDGVSALHWESPKLKNCIERIPKLMERAQ
HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDRGNVASLSTLQIDQMEERKHDTDYQLSLCRSMMEEDMILPFAFHRAAILLSKEKRFS
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EALDVCLYVQRWCDNAKSNWDGVSALHWESPKLKNCIERIPKLMERAQ
HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA