Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080657
Identifier: 99080657
GI number: 99080657
Start: 858386
End: 858688
Strand: Reverse
Name: 99080657
Synonym: TM1040_0816
Alternate gene names: NA
Gene position: 858688-858386 (Counterclockwise)
Preceding gene: 99080658
Following gene: 99080656
Centisome position: 26.83
GC content: 54.46
Gene sequence:
>303_bases ATGCGGATCATCGCCAGAAACACCATCACGGATTTTGCAGCGAACCACCCGGAAACCCGCGCGCCGTTGGAGCACTGGTT CCGCATCACCAAAGCAGCCGAATGGAACACCCCACAAGAGGTTCTGGCTTCATTTTCCAAGTCCAAGGTTTTGAACGCTG AGCGTGTCAGGTTCGAAATCGGCGGCGGAGATTACCGACTGATCGCAGCATTCGATTTTCGCCGCAAGATCGTGTTCATC AAGTTCATCGGCACCCATGCCGAATACGACCGCATCGACGCCCTTACCGTTTCAAAGCACTGA
Upstream 100 bases:
>100_bases CTTGAGGCCGAGCCGATTGACTTCCCATTTTGGGAACAAACCGCTTGACTGAAGGCCACTCCAGCGCTACATTCCCGATA CGGGAACAAACGGTTGCGAA
Downstream 100 bases:
>100_bases AAGGAACATGCCAATGACTATTCGCCCAATTCGGGCAGACGCTGATCACGCTGCTGCCCTTTCTCGCATCGAAGAACTTT GGGGTGCAGAACCTGGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MRIIARNTITDFAANHPETRAPLEHWFRITKAAEWNTPQEVLASFSKSKVLNAERVRFEIGGGDYRLIAAFDFRRKIVFI KFIGTHAEYDRIDALTVSKH
Sequences:
>Translated_100_residues MRIIARNTITDFAANHPETRAPLEHWFRITKAAEWNTPQEVLASFSKSKVLNAERVRFEIGGGDYRLIAAFDFRRKIVFI KFIGTHAEYDRIDALTVSKH >Mature_100_residues MRIIARNTITDFAANHPETRAPLEHWFRITKAAEWNTPQEVLASFSKSKVLNAERVRFEIGGGDYRLIAAFDFRRKIVFI KFIGTHAEYDRIDALTVSKH
Specific function: Unknown
COG id: COG4680
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11590; Mature: 11590
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIARNTITDFAANHPETRAPLEHWFRITKAAEWNTPQEVLASFSKSKVLNAERVRFEI CEEEECCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE GGGDYRLIAAFDFRRKIVFIKFIGTHAEYDRIDALTVSKH CCCCEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCC >Mature Secondary Structure MRIIARNTITDFAANHPETRAPLEHWFRITKAAEWNTPQEVLASFSKSKVLNAERVRFEI CEEEECCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE GGGDYRLIAAFDFRRKIVFIKFIGTHAEYDRIDALTVSKH CCCCEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA