Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080659

Identifier: 99080659

GI number: 99080659

Start: 859121

End: 859564

Strand: Reverse

Name: 99080659

Synonym: TM1040_0818

Alternate gene names: NA

Gene position: 859564-859121 (Counterclockwise)

Preceding gene: 99080669

Following gene: 99080658

Centisome position: 26.85

GC content: 54.5

Gene sequence:

>444_bases
TTGACCCTCGTCGCGGATGCGGCGCGGGCAGGAGATTATTGGATGCGGAAAATTCTAATTGCGGTAGCTACCGTGGGTGC
TATTGGTTTTGCCCCATCGAACGCGCTAGGCGCGCCCAAACTAGATGAACTTGGTAGCGATGTTTCACTCTGCTGGAACG
ACGAGGCGCTGAGCGACGACGCGGCCAGAGCCACGACAACCGTGGAATTCCATGTGGGACAAGATGGACTGGTGGATCTG
AACACCATCAAGATTGTTTCCAGCACTGCGATCACTCAAACAGCGTCCAAGCAAGCCTTTGAAGCCGCTCGCAGGGCTAT
AATCAGATGCCTGATGTCAGATCCGGTTGATTTGTCTTTCTGGGACACCACCTTGGAAGCGGTCTTTTCTGTCGCCACGG
GTGTCAAAGTTCGCTACCAGCCCAACACCACGGTAGACACATGA

Upstream 100 bases:

>100_bases
GCGCACAAACCGGCCCAGCTCATCGCGGGCGCGAACCACTGGTTGGCTATCGACAGCAATGCCGAGACGTGCAAAGTCGG
TCATTTAGGCCTCACTGAGT

Downstream 100 bases:

>100_bases
TGGATCGGGGCAATGTCGCATCACTATCCACCCTGCAGATTGACCAAATGGAAGAAAGGAAGCACGACACTGATTATCAG
CTGTCGCTCTGCCGGAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTLVADAARAGDYWMRKILIAVATVGAIGFAPSNALGAPKLDELGSDVSLCWNDEALSDDAARATTTVEFHVGQDGLVDL
NTIKIVSSTAITQTASKQAFEAARRAIIRCLMSDPVDLSFWDTTLEAVFSVATGVKVRYQPNTTVDT

Sequences:

>Translated_147_residues
MTLVADAARAGDYWMRKILIAVATVGAIGFAPSNALGAPKLDELGSDVSLCWNDEALSDDAARATTTVEFHVGQDGLVDL
NTIKIVSSTAITQTASKQAFEAARRAIIRCLMSDPVDLSFWDTTLEAVFSVATGVKVRYQPNTTVDT
>Mature_146_residues
TLVADAARAGDYWMRKILIAVATVGAIGFAPSNALGAPKLDELGSDVSLCWNDEALSDDAARATTTVEFHVGQDGLVDLN
TIKIVSSTAITQTASKQAFEAARRAIIRCLMSDPVDLSFWDTTLEAVFSVATGVKVRYQPNTTVDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15668; Mature: 15537

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVADAARAGDYWMRKILIAVATVGAIGFAPSNALGAPKLDELGSDVSLCWNDEALSDD
CCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC
AARATTTVEFHVGQDGLVDLNTIKIVSSTAITQTASKQAFEAARRAIIRCLMSDPVDLSF
CCCEEEEEEEEECCCCCEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WDTTLEAVFSVATGVKVRYQPNTTVDT
HHHHHHHHHHHHCCCEEEECCCCCCCC
>Mature Secondary Structure 
TLVADAARAGDYWMRKILIAVATVGAIGFAPSNALGAPKLDELGSDVSLCWNDEALSDD
CEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC
AARATTTVEFHVGQDGLVDLNTIKIVSSTAITQTASKQAFEAARRAIIRCLMSDPVDLSF
CCCEEEEEEEEECCCCCEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WDTTLEAVFSVATGVKVRYQPNTTVDT
HHHHHHHHHHHHCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA