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The map label for this gene is 99080656

Identifier: 99080656

GI number: 99080656

Start: 858001

End: 858372

Strand: Reverse

Name: 99080656

Synonym: TM1040_0815

Alternate gene names: NA

Gene position: 858372-858001 (Counterclockwise)

Preceding gene: 99080657

Following gene: 99080640

Centisome position: 26.82

GC content: 59.14

Gene sequence:

>372_bases
ATGACTATTCGCCCAATTCGGGCAGACGCTGATCACGCTGCTGCCCTTTCTCGCATCGAAGAACTTTGGGGTGCAGAACC
TGGCACAGAAGCCGGTGACGAACTCGATATCCTCGTTGACTTGGTTGAGCACTATGAGGAACGGCAGTTCCCTTTTCCAG
AACTGGCGCCCATCGACCTTCTGAAGGCGCACATGGAAGCGACGGGGCGCACCCAGGCAGATCTGGCAGCGCTGCTAGGG
TCGCGCCCCCGCGCGTCCGAAGTCCTCAACCGCAAGCGCGCCTTGACCGTTGACATGATCCACAAGCTCAGCAGCGAGTG
GCATATTCCTGCGGAATGCTTGGTTCGCCCCTATCATCTGGAAGCCGCCTAG

Upstream 100 bases:

>100_bases
TTTCGCCGCAAGATCGTGTTCATCAAGTTCATCGGCACCCATGCCGAATACGACCGCATCGACGCCCTTACCGTTTCAAA
GCACTGAAAGGAACATGCCA

Downstream 100 bases:

>100_bases
ACCCGCTCAATTGGCGGGACTGTGAACACGTCAGCGCCCTTCACCTTCTCGGCCAGGTATTGCTGGCTCATGTGAACCAG
AAGCTGAACCTCCCAAGGCT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator With HTH Domain; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcription Regulator; Transcription Regulator With HTH Domain Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Xre Family; Transcription Regulator Containing HTH Domain; Transcription Regulator Protein; Transcritional Regulatior Protein; Transcription Regulator Containing Helix Turn Helix Domain; HTH_3 Family Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator YgjM; Transcriptional Regulator Protein; Transcription Regulator With HTH Domain-Containing Protein

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTIRPIRADADHAAALSRIEELWGAEPGTEAGDELDILVDLVEHYEERQFPFPELAPIDLLKAHMEATGRTQADLAALLG
SRPRASEVLNRKRALTVDMIHKLSSEWHIPAECLVRPYHLEAA

Sequences:

>Translated_123_residues
MTIRPIRADADHAAALSRIEELWGAEPGTEAGDELDILVDLVEHYEERQFPFPELAPIDLLKAHMEATGRTQADLAALLG
SRPRASEVLNRKRALTVDMIHKLSSEWHIPAECLVRPYHLEAA
>Mature_122_residues
TIRPIRADADHAAALSRIEELWGAEPGTEAGDELDILVDLVEHYEERQFPFPELAPIDLLKAHMEATGRTQADLAALLGS
RPRASEVLNRKRALTVDMIHKLSSEWHIPAECLVRPYHLEAA

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13757; Mature: 13626

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRPIRADADHAAALSRIEELWGAEPGTEAGDELDILVDLVEHYEERQFPFPELAPIDL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH
LKAHMEATGRTQADLAALLGSRPRASEVLNRKRALTVDMIHKLSSEWHIPAECLVRPYHL
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC
EAA
CCC
>Mature Secondary Structure 
TIRPIRADADHAAALSRIEELWGAEPGTEAGDELDILVDLVEHYEERQFPFPELAPIDL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH
LKAHMEATGRTQADLAALLGSRPRASEVLNRKRALTVDMIHKLSSEWHIPAECLVRPYHL
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC
EAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA