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The map label for this gene is yfbS [C]

Identifier: 94985490

GI number: 94985490

Start: 1473302

End: 1475047

Strand: Reverse

Name: yfbS [C]

Synonym: Dgeo_1390

Alternate gene names: 94985490

Gene position: 1475047-1473302 (Counterclockwise)

Preceding gene: 94985491

Following gene: 94985488

Centisome position: 59.79

GC content: 68.44

Gene sequence:

>1746_bases
ATGGATCCCGTCACCATCCTGCTGATTCTGTTTGGCCTGGCCCTGGTGCTGTTCGCCACCGAATGGCTCCCAGTGGACGT
CACCGCACTGCTGCTGCTGGGTGCCCTGCTGGTCCTGGGGCTGCTCCAGCCTAAGGAGGCTTTCGCGGGCTTCGGCAGCG
ACACCGTGCTGACGCTGGCCAGTCTGTTCATCCTGACCCGGGTGTTGCTGCGGGCAGGTGTGATCGAGTGGGTGGGCGTC
ATGTTGGCGCGCCGGGCACGCAACGCGGGCGGCGTGATTCGGGGAATGCTCAGCGCCGTGGCGGGTGTCAGCGCCTTGAC
CAGCAACACGGCCACGACGGCGGTCTTTCTCCCGGTCGTGACCGGCCTGGCTCGGCGCGCCGGGATCGCCCCCAGCCGGG
TGCTGATGCCGCTCGCCTTCGCCAGCATCCTGGGAGGGACGGTAACCCTGATTGGCACCACCACCAACCTGGTGGTTTCG
GGCGCACTTCCGGCGCTGGGTCTCCAGCCGCTGGGCTTTTTCGAGCTGGCCTGGGTAGGTCTGCCGGTGGCGGTGGTGGG
CCTGCTGTACCTCTTTTTTGTCGCGCCGCGCCTGCTGCCTGCGCGGGACGCAGTCCTGGAAGAGTCCCTACGCGCCTACC
TTGCGGACTTGACGGTTGCCCCCGGCAGTCCCCTTGCCGGGCAGACACTGCGCGAGACGGGGCTGGGCCGCGATCACGGC
TTGACCGTTGTTGCGGTGCGGCGCGGCAGCAACACCTTCTATGCTCCCGGCCCCGACTTCCGGGTGCAGGAGGGCGACAC
GCTCGCGGTAGAGGGGGCGCCCGACCGCATCCTGAGCGGCAAAAGCACCCTGGGCATCTTCAGCAAAAGCGAGCAGAAAC
TTCAGGTGGAAGGCGGCGCCGCTCCGGTACAGCTGGTTGAGGCGGTGGTGATGCCCGGGAGTCCGTTGGCGGGGCGGACC
CTGCGCGAGTCGCGCTTTCGCGAGCGCTACGGCCTGTCTGTGTTGGCCCTGCACCGCCGCGCTCGCACGGTGGAGCGGCT
GGCGGGCCTGCGCGTGCAGGTGGGGGACGTGCTGATGATTCAGGGGCGTGCCGAGCGCATCGCGGCTCTGGGTGACCACC
TGACGGTCCTGGGTGACCTCACCGAGGCGCAGCGCGACCTGCGCAAAGCACCGCTGGCCCTGCTGCTCTTCGGCGGGGCG
GTGGCCCTCGGTGCCTTGGGCCTGCTGCCCCTCAGCGTCGCGGTCGTGATCGCCGTGGCGTTGGCGCTGGCCTTGCGTCT
GATTGCGCCCGAGGAAGCCTACCGCGCCGTCGAGTGGCCGGTGATTGTGTTGGTGGCGTGCATGCTCGCCTTTGGCACCG
CCTTTGAGGACACTGGAGCCGCCCGCGTGCTGACCGGCGCCCTGTCCGGCGTGCTGGCGCCGCTTGGCCCCTACGGTCTG
CTCGCTGCCCTCTTCGCCGTCACGGTGGCGCTCACCCAGCCCATGAGCAACCAGGCCGCTGCCTTGGTGATGCTTCCCCT
CGCGATCGGCACCGCCAAGGCCCTGGGCTACGATCCCCGCCCTTTTGTGATCGGCATCACGGTAGCGGCCAGCAACTCCT
TCATCACGCCGCTGGAACCGTCTTGCATGCTGGTCTACGGTCCGGGACGTTACCGCTTTCTGGACTTTGTGCGGGTGGGG
ACTGGACTGACGCTGGTGACCTTTGCGGTCGCGCTGTTGGTGATTCCGCGGGTGTGGCCGTTCTGA

Upstream 100 bases:

>100_bases
GTACTGAAGGGGAAAACACTCGCCCTGCCTTGAGCGGTTCGGCGCCTTCCCCAAAGGTGCAACCGGGCGCACATTCCCGA
GCCGCGCCCCGTGGAGACTC

Downstream 100 bases:

>100_bases
GCGGCCCGGTTAGATAAACAGCGGCGCGTCCGGATCGTCGGGGAGGGGGCGGCCCTTGCGTGCCAGCAGGGCAGCGGTCG
TTCCAATGCCGACCAGGGCA

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MDPVTILLILFGLALVLFATEWLPVDVTALLLLGALLVLGLLQPKEAFAGFGSDTVLTLASLFILTRVLLRAGVIEWVGV
MLARRARNAGGVIRGMLSAVAGVSALTSNTATTAVFLPVVTGLARRAGIAPSRVLMPLAFASILGGTVTLIGTTTNLVVS
GALPALGLQPLGFFELAWVGLPVAVVGLLYLFFVAPRLLPARDAVLEESLRAYLADLTVAPGSPLAGQTLRETGLGRDHG
LTVVAVRRGSNTFYAPGPDFRVQEGDTLAVEGAPDRILSGKSTLGIFSKSEQKLQVEGGAAPVQLVEAVVMPGSPLAGRT
LRESRFRERYGLSVLALHRRARTVERLAGLRVQVGDVLMIQGRAERIAALGDHLTVLGDLTEAQRDLRKAPLALLLFGGA
VALGALGLLPLSVAVVIAVALALALRLIAPEEAYRAVEWPVIVLVACMLAFGTAFEDTGAARVLTGALSGVLAPLGPYGL
LAALFAVTVALTQPMSNQAAALVMLPLAIGTAKALGYDPRPFVIGITVAASNSFITPLEPSCMLVYGPGRYRFLDFVRVG
TGLTLVTFAVALLVIPRVWPF

Sequences:

>Translated_581_residues
MDPVTILLILFGLALVLFATEWLPVDVTALLLLGALLVLGLLQPKEAFAGFGSDTVLTLASLFILTRVLLRAGVIEWVGV
MLARRARNAGGVIRGMLSAVAGVSALTSNTATTAVFLPVVTGLARRAGIAPSRVLMPLAFASILGGTVTLIGTTTNLVVS
GALPALGLQPLGFFELAWVGLPVAVVGLLYLFFVAPRLLPARDAVLEESLRAYLADLTVAPGSPLAGQTLRETGLGRDHG
LTVVAVRRGSNTFYAPGPDFRVQEGDTLAVEGAPDRILSGKSTLGIFSKSEQKLQVEGGAAPVQLVEAVVMPGSPLAGRT
LRESRFRERYGLSVLALHRRARTVERLAGLRVQVGDVLMIQGRAERIAALGDHLTVLGDLTEAQRDLRKAPLALLLFGGA
VALGALGLLPLSVAVVIAVALALALRLIAPEEAYRAVEWPVIVLVACMLAFGTAFEDTGAARVLTGALSGVLAPLGPYGL
LAALFAVTVALTQPMSNQAAALVMLPLAIGTAKALGYDPRPFVIGITVAASNSFITPLEPSCMLVYGPGRYRFLDFVRVG
TGLTLVTFAVALLVIPRVWPF
>Mature_581_residues
MDPVTILLILFGLALVLFATEWLPVDVTALLLLGALLVLGLLQPKEAFAGFGSDTVLTLASLFILTRVLLRAGVIEWVGV
MLARRARNAGGVIRGMLSAVAGVSALTSNTATTAVFLPVVTGLARRAGIAPSRVLMPLAFASILGGTVTLIGTTTNLVVS
GALPALGLQPLGFFELAWVGLPVAVVGLLYLFFVAPRLLPARDAVLEESLRAYLADLTVAPGSPLAGQTLRETGLGRDHG
LTVVAVRRGSNTFYAPGPDFRVQEGDTLAVEGAPDRILSGKSTLGIFSKSEQKLQVEGGAAPVQLVEAVVMPGSPLAGRT
LRESRFRERYGLSVLALHRRARTVERLAGLRVQVGDVLMIQGRAERIAALGDHLTVLGDLTEAQRDLRKAPLALLLFGGA
VALGALGLLPLSVAVVIAVALALALRLIAPEEAYRAVEWPVIVLVACMLAFGTAFEDTGAARVLTGALSGVLAPLGPYGL
LAALFAVTVALTQPMSNQAAALVMLPLAIGTAKALGYDPRPFVIGITVAASNSFITPLEPSCMLVYGPGRYRFLDFVRVG
TGLTLVTFAVALLVIPRVWPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=611, Percent_Identity=32.2422258592471, Blast_Score=258, Evalue=7e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 60767; Mature: 60767

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVTILLILFGLALVLFATEWLPVDVTALLLLGALLVLGLLQPKEAFAGFGSDTVLTLA
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHH
SLFILTRVLLRAGVIEWVGVMLARRARNAGGVIRGMLSAVAGVSALTSNTATTAVFLPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TGLARRAGIAPSRVLMPLAFASILGGTVTLIGTTTNLVVSGALPALGLQPLGFFELAWVG
HHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECHHHEEEECCCCCCCCCCCCHHHHHHHH
LPVAVVGLLYLFFVAPRLLPARDAVLEESLRAYLADLTVAPGSPLAGQTLRETGLGRDHG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCC
LTVVAVRRGSNTFYAPGPDFRVQEGDTLAVEGAPDRILSGKSTLGIFSKSEQKLQVEGGA
EEEEEEEECCCEEECCCCCCEECCCCEEEECCCCCHHHCCCCCEEEECCCCCEEEECCCC
APVQLVEAVVMPGSPLAGRTLRESRFRERYGLSVLALHRRARTVERLAGLRVQVGDVLMI
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCEEEE
QGRAERIAALGDHLTVLGDLTEAQRDLRKAPLALLLFGGAVALGALGLLPLSVAVVIAVA
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALALRLIAPEEAYRAVEWPVIVLVACMLAFGTAFEDTGAARVLTGALSGVLAPLGPYGL
HHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHH
LAALFAVTVALTQPMSNQAAALVMLPLAIGTAKALGYDPRPFVIGITVAASNSFITPLEP
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC
SCMLVYGPGRYRFLDFVRVGTGLTLVTFAVALLVIPRVWPF
CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDPVTILLILFGLALVLFATEWLPVDVTALLLLGALLVLGLLQPKEAFAGFGSDTVLTLA
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHH
SLFILTRVLLRAGVIEWVGVMLARRARNAGGVIRGMLSAVAGVSALTSNTATTAVFLPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TGLARRAGIAPSRVLMPLAFASILGGTVTLIGTTTNLVVSGALPALGLQPLGFFELAWVG
HHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECHHHEEEECCCCCCCCCCCCHHHHHHHH
LPVAVVGLLYLFFVAPRLLPARDAVLEESLRAYLADLTVAPGSPLAGQTLRETGLGRDHG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCC
LTVVAVRRGSNTFYAPGPDFRVQEGDTLAVEGAPDRILSGKSTLGIFSKSEQKLQVEGGA
EEEEEEEECCCEEECCCCCCEECCCCEEEECCCCCHHHCCCCCEEEECCCCCEEEECCCC
APVQLVEAVVMPGSPLAGRTLRESRFRERYGLSVLALHRRARTVERLAGLRVQVGDVLMI
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCEEEE
QGRAERIAALGDHLTVLGDLTEAQRDLRKAPLALLLFGGAVALGALGLLPLSVAVVIAVA
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALALRLIAPEEAYRAVEWPVIVLVACMLAFGTAFEDTGAARVLTGALSGVLAPLGPYGL
HHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHH
LAALFAVTVALTQPMSNQAAALVMLPLAIGTAKALGYDPRPFVIGITVAASNSFITPLEP
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC
SCMLVYGPGRYRFLDFVRVGTGLTLVTFAVALLVIPRVWPF
CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]