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The map label for this gene is ugpA [C]

Identifier: 94972332

GI number: 94972332

Start: 153221

End: 154147

Strand: Direct

Name: ugpA [C]

Synonym: Dgeo_2869

Alternate gene names: 94972332

Gene position: 153221-154147 (Clockwise)

Preceding gene: 94972333

Following gene: 94972331

Centisome position: 26.69

GC content: 62.24

Gene sequence:

>927_bases
ATGACCACGGCTGCTCCCCCCACCACGACGACGCGGGTCCCTCCTGCGCCCAAGCGCGGATTGCGGCTCACGCCCGCCGC
GCTGATCTGGCCCGCGCTGCTGTACCTGATCCTGACGACCCAGGTGCCGTTTTTCATGACGGTGTACTACTCGTTCTTCC
GCTACAACCTGGTGGACCCCACCAGTCGTCCCTTCATTGGGCTAGAGAATTACGTCACCCTCTTCACCGACCCGCAGAAT
CTGCGCATCCTGCTGAATACCATTGTGTTGGCAGGTGGCACCCTGATCCTGACCCTGGTGATCGGCGGGGCACTGGCGCT
GCTGCTCAACCGGCCCTTTGTGGGGCGAGCGCTCTTGCGAACACTGCTGATCAGCTCCTTCCTGGTCATGCCGGTCGTGA
CCGCCGTGATCTGGAAGAACATGCTGCTCAATCCGGTCTTTGGCTTCTTCTCCTGGCTGGTGACCAAGCTGGGCGGCCAG
CCGGTGGACTGGCTGGCCCAGTACCCGATGGCCAGCCTGATCGCCATGATCACCTGGGAATGGACCCCCTTTGCCATGCT
GATCCTGCTGACCGGCCTGCAAAGCCTCCCCGATGACCAACTGGAGGCCGCGCGGCTAGACGGGGCAGGCCCCTTGCAGG
AGTTCCAACACATCGTTCTTCCGCACTGGACCCAGGCCATTCAGGTCGTGGTGCTGATGGAGACCATCGCCCTTCTGCAG
GTCTACGGCGAGATCTACGGCTCGACGTCGGGCGGCCCGGGCATCGCCACCACCAACCTGCCGTACTTCATCTACCAAAA
GGCCTTTGCCGAGTACAACATCGGCTTGGCCAGCGCGGCAGGCGTGATTACGGTGATCCTGACCAATATCCTGGCAATCT
ATCTGCTGCGGATGATTGGCCGCTCCCGCAGCAGTCAGGGAGCATGA

Upstream 100 bases:

>100_bases
GCGGTTACCAGAAGTAAGCCTGCGGACAACGCAACGTCGGAGGAGGGGCGGAAGGGAGCACGCACGCCTTCTGCCCCTCG
CTCCCCTTTGAGGTGATCTC

Downstream 100 bases:

>100_bases
GATGACGACCCTGCCTTCCTCTGCTGACCACCGCTCCGCCGCCTCACGTCTGCGGGCCAGAAACATCTTGCTCACGGTGG
TCACCTACCTGATCGCGCTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTTAAPPTTTTRVPPAPKRGLRLTPAALIWPALLYLILTTQVPFFMTVYYSFFRYNLVDPTSRPFIGLENYVTLFTDPQN
LRILLNTIVLAGGTLILTLVIGGALALLLNRPFVGRALLRTLLISSFLVMPVVTAVIWKNMLLNPVFGFFSWLVTKLGGQ
PVDWLAQYPMASLIAMITWEWTPFAMLILLTGLQSLPDDQLEAARLDGAGPLQEFQHIVLPHWTQAIQVVVLMETIALLQ
VYGEIYGSTSGGPGIATTNLPYFIYQKAFAEYNIGLASAAGVITVILTNILAIYLLRMIGRSRSSQGA

Sequences:

>Translated_308_residues
MTTAAPPTTTTRVPPAPKRGLRLTPAALIWPALLYLILTTQVPFFMTVYYSFFRYNLVDPTSRPFIGLENYVTLFTDPQN
LRILLNTIVLAGGTLILTLVIGGALALLLNRPFVGRALLRTLLISSFLVMPVVTAVIWKNMLLNPVFGFFSWLVTKLGGQ
PVDWLAQYPMASLIAMITWEWTPFAMLILLTGLQSLPDDQLEAARLDGAGPLQEFQHIVLPHWTQAIQVVVLMETIALLQ
VYGEIYGSTSGGPGIATTNLPYFIYQKAFAEYNIGLASAAGVITVILTNILAIYLLRMIGRSRSSQGA
>Mature_307_residues
TTAAPPTTTTRVPPAPKRGLRLTPAALIWPALLYLILTTQVPFFMTVYYSFFRYNLVDPTSRPFIGLENYVTLFTDPQNL
RILLNTIVLAGGTLILTLVIGGALALLLNRPFVGRALLRTLLISSFLVMPVVTAVIWKNMLLNPVFGFFSWLVTKLGGQP
VDWLAQYPMASLIAMITWEWTPFAMLILLTGLQSLPDDQLEAARLDGAGPLQEFQHIVLPHWTQAIQVVVLMETIALLQV
YGEIYGSTSGGPGIATTNLPYFIYQKAFAEYNIGLASAAGVITVILTNILAIYLLRMIGRSRSSQGA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=249, Percent_Identity=30.5220883534137, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787570, Length=257, Percent_Identity=29.5719844357977, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790465, Length=249, Percent_Identity=30.1204819277108, Blast_Score=78, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33888; Mature: 33756

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAAPPTTTTRVPPAPKRGLRLTPAALIWPALLYLILTTQVPFFMTVYYSFFRYNLVDP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
TSRPFIGLENYVTLFTDPQNLRILLNTIVLAGGTLILTLVIGGALALLLNRPFVGRALLR
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TLLISSFLVMPVVTAVIWKNMLLNPVFGFFSWLVTKLGGQPVDWLAQYPMASLIAMITWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHCC
WTPFAMLILLTGLQSLPDDQLEAARLDGAGPLQEFQHIVLPHWTQAIQVVVLMETIALLQ
CHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VYGEIYGSTSGGPGIATTNLPYFIYQKAFAEYNIGLASAAGVITVILTNILAIYLLRMIG
HHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
RSRSSQGA
CCCCCCCC
>Mature Secondary Structure 
TTAAPPTTTTRVPPAPKRGLRLTPAALIWPALLYLILTTQVPFFMTVYYSFFRYNLVDP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
TSRPFIGLENYVTLFTDPQNLRILLNTIVLAGGTLILTLVIGGALALLLNRPFVGRALLR
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TLLISSFLVMPVVTAVIWKNMLLNPVFGFFSWLVTKLGGQPVDWLAQYPMASLIAMITWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHCC
WTPFAMLILLTGLQSLPDDQLEAARLDGAGPLQEFQHIVLPHWTQAIQVVVLMETIALLQ
CHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VYGEIYGSTSGGPGIATTNLPYFIYQKAFAEYNIGLASAAGVITVILTNILAIYLLRMIG
HHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
RSRSSQGA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]