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The map label for this gene is ycjP [C]

Identifier: 94972331

GI number: 94972331

Start: 154149

End: 155003

Strand: Direct

Name: ycjP [C]

Synonym: Dgeo_2868

Alternate gene names: 94972331

Gene position: 154149-155003 (Clockwise)

Preceding gene: 94972332

Following gene: 94972330

Centisome position: 26.85

GC content: 62.11

Gene sequence:

>855_bases
ATGACGACCCTGCCTTCCTCTGCTGACCACCGCTCCGCCGCCTCACGTCTGCGGGCCAGAAACATCTTGCTCACGGTGGT
CACCTACCTGATCGCGCTCGCGTTCCTGTTTCCGCTGCTCTGGATGATCCTGGCGGCCTTCAAGACCGAAGCCCAGGCTT
TTGCCACGCCGCCCGTCTTTTTCTTCACGCCGATCTGGGAGAACTTCCAAAAGGCGCTGCCCTCGTACTTCCCAGCCCTG
AAAAACAGCCTGGTCGCTGCGATCGGCAGCACACTGCTCGCCTTTGTGCTGGGGCTGCCCGCCGCCTTCGCGCTGGCGGT
GTACCCCACCCGGCGCGCTCAGGGCGTTCTGACCTGGATGCTCTCCACCAAGTTCATGCCGGCGGTCGGTGTGATCGTGC
CCCTCTTCTTGCTGTTTCGCAACCTGCACCTGCTCGACACGCTGCCGGGACTCATCTTGATGTACACGACCATGAACCTG
CCGCTGGTCGTGTGGATGATGCACTCGTACATGTCAGAGATTCCCTTTGCCATCTACGAGGCCGCGAAGGTGGACGGTGC
CTCGGTGGGGCAGGAATTTTTCCGGATCGCCCTGCCGCTCTCGATGCCGGGCATCTCCGCGACCGCACTGCTGGCGCTGA
TCTTTGCTTGGAACGAGGTGTTCTTCGCCATCAACCTCACCAATTCCCACGCGGCGCCCCTCTCGGTCTTTATCGGCTCG
TTTAAGACCTCAGAAGGTCTCTTCTGGGCGCAGCTGAGTGCCGCCGCCACCCTGACCGTGTTGCCCGTGCTGATCTTCGG
CTGGATTGCTCAGCGCCAGCTTGTGCGCGGCCTGAGCTTCGGAGCGGTGAAGTGA

Upstream 100 bases:

>100_bases
GCCAGCGCGGCAGGCGTGATTACGGTGATCCTGACCAATATCCTGGCAATCTATCTGCTGCGGATGATTGGCCGCTCCCG
CAGCAGTCAGGGAGCATGAG

Downstream 100 bases:

>100_bases
GCGCCCCAGCAGGAGGAGGTGAACCCGTGTCTCCCCCATCATCCCGCCCGCCCGAACCGGCTCACCTCCAAGCCACCACC
GCCGAGCTTGTGGAGCGGGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTTLPSSADHRSAASRLRARNILLTVVTYLIALAFLFPLLWMILAAFKTEAQAFATPPVFFFTPIWENFQKALPSYFPAL
KNSLVAAIGSTLLAFVLGLPAAFALAVYPTRRAQGVLTWMLSTKFMPAVGVIVPLFLLFRNLHLLDTLPGLILMYTTMNL
PLVVWMMHSYMSEIPFAIYEAAKVDGASVGQEFFRIALPLSMPGISATALLALIFAWNEVFFAINLTNSHAAPLSVFIGS
FKTSEGLFWAQLSAAATLTVLPVLIFGWIAQRQLVRGLSFGAVK

Sequences:

>Translated_284_residues
MTTLPSSADHRSAASRLRARNILLTVVTYLIALAFLFPLLWMILAAFKTEAQAFATPPVFFFTPIWENFQKALPSYFPAL
KNSLVAAIGSTLLAFVLGLPAAFALAVYPTRRAQGVLTWMLSTKFMPAVGVIVPLFLLFRNLHLLDTLPGLILMYTTMNL
PLVVWMMHSYMSEIPFAIYEAAKVDGASVGQEFFRIALPLSMPGISATALLALIFAWNEVFFAINLTNSHAAPLSVFIGS
FKTSEGLFWAQLSAAATLTVLPVLIFGWIAQRQLVRGLSFGAVK
>Mature_283_residues
TTLPSSADHRSAASRLRARNILLTVVTYLIALAFLFPLLWMILAAFKTEAQAFATPPVFFFTPIWENFQKALPSYFPALK
NSLVAAIGSTLLAFVLGLPAAFALAVYPTRRAQGVLTWMLSTKFMPAVGVIVPLFLLFRNLHLLDTLPGLILMYTTMNLP
LVVWMMHSYMSEIPFAIYEAAKVDGASVGQEFFRIALPLSMPGISATALLALIFAWNEVFFAINLTNSHAAPLSVFIGSF
KTSEGLFWAQLSAAATLTVLPVLIFGWIAQRQLVRGLSFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=259, Percent_Identity=32.8185328185328, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790464, Length=277, Percent_Identity=30.6859205776173, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789860, Length=205, Percent_Identity=29.2682926829268, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31152; Mature: 31021

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLPSSADHRSAASRLRARNILLTVVTYLIALAFLFPLLWMILAAFKTEAQAFATPPVF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FFTPIWENFQKALPSYFPALKNSLVAAIGSTLLAFVLGLPAAFALAVYPTRRAQGVLTWM
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSTKFMPAVGVIVPLFLLFRNLHLLDTLPGLILMYTTMNLPLVVWMMHSYMSEIPFAIYE
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHH
AAKVDGASVGQEFFRIALPLSMPGISATALLALIFAWNEVFFAINLTNSHAAPLSVFIGS
HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHC
FKTSEGLFWAQLSAAATLTVLPVLIFGWIAQRQLVRGLSFGAVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTLPSSADHRSAASRLRARNILLTVVTYLIALAFLFPLLWMILAAFKTEAQAFATPPVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FFTPIWENFQKALPSYFPALKNSLVAAIGSTLLAFVLGLPAAFALAVYPTRRAQGVLTWM
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSTKFMPAVGVIVPLFLLFRNLHLLDTLPGLILMYTTMNLPLVVWMMHSYMSEIPFAIYE
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHH
AAKVDGASVGQEFFRIALPLSMPGISATALLALIFAWNEVFFAINLTNSHAAPLSVFIGS
HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHC
FKTSEGLFWAQLSAAATLTVLPVLIFGWIAQRQLVRGLSFGAVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]