Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
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Accession | NC_008010 |
Length | 574,127 |
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The map label for this gene is katA [H]
Identifier: 94972195
GI number: 94972195
Start: 298866
End: 300497
Strand: Direct
Name: katA [H]
Synonym: Dgeo_2728
Alternate gene names: 94972195
Gene position: 298866-300497 (Clockwise)
Preceding gene: 94972197
Following gene: 94972194
Centisome position: 52.06
GC content: 63.11
Gene sequence:
>1632_bases ATGAGCGACCAGAAGCAACCCAAGAACACCGGCATCGCCGGAACTGCCGTCGAAGGGATGGGCAGCCCCGCCGACACCCG GTTTGCCCCCGGCGAGCAGGCGCAGACCCTCACCACCCGCCAGGGCCACCCGGTGACCAACAACCAGAACCTGCGCACGG TCGGCAACCGCGGCCCGGCGACGCTGGAAAACTACCACTTCATCGAGAAGCTCTCTCATTTTGATCGCGAGCGCATTCCC GAACGGGTGGTACACGCTCGCGGGGCCGGCGCACACGGCTACTTCGAGGCCTATGGCAAGGTCGGGGACGAGCCGATCAG CCGCTACACCCGCGCCAAGCTTTTCCAGGAGCCGGGCAAGCGCACCCCGGTGTTCGTGCGGTTCTCAACGGTAGGACACG GCGGGCACTCACCGGAGACCCTGCGCGACCCGCGCGGTTTTGCGGTGAAGTTCTACACCGAAGATGGCAACTGGGATCTT GTCGGCAACAACCTCAAGGTCTTTTTTATCCGTGACGCAATCAAATTTCCTGACCTGATTCACTCGCAGAAGCCCGATCC GGTCACCAACATCCAGAGCCAGGAACGGATCTTTGACTTCTTCTGCGGCACGCCCGAAGCGCTGCACATGATCACCCTGC TGTACTCGCCCTGGGGCATCCCGGCGAGCTACCGCCACATGCAGGGGTCAGGCGTGAACACCTACAAGTGGGTAAACGAC AAAGGCGAGGCGGTGCTGGTGAAGTATCACTGGGAACCCCTCCAGGGCATTCGCAATCTGACACAGGCGGAGGCCGAGGC CATCCAGGCCAAAAACTTCAACCACGCGACCCAGGATCTCTACGAGGCCATCGAGCGCGGTGACTACCCGCAGTGGGAGT TGCTGGTCCAGATCATGCCGGACGGCGAGCATCCTGAACTCGACTTTGATCCACTCGACGACACCAAAATCTGGCCGCGC GACCAGTTCCCCTGGCTGCCAGTGGGCCGGATGACCCTCAACCGCAATCCCGAGAACTACTTTGCCGAAGTCGAGCAGGC CGCCTTTGGAACCGGCGTCTTGGTGGACGGGCTGGACTTCAGCGATGACAAGATGCTCCAGGGCCGCACCTTCGCGTATT CGGACACCCAGCGCTACCGCATCGGCCCCAACTACCTGCAACTGCCGATCAACGCCCCCAAAAAGCATGTGGCCACCAAC CAGCGCGACGGGCAGATGACCTACCGGGTGGACACGGCCCCCGGCCAGAATCCGCACGTGAACTACGAGCCTTCCACGCT CAATGGCCTCTCGGAAGCGCCCCGCCAGGCGCCCGACCACACGCCCTACATCGCGGGCAACCTGGTGCGCCAGAGCATCG ACCGGACCAACGACTTCAAGCAGGCGGGCGAGCAGTACCGCGCCTTCGAAGATTGGGAACGCGACGAGCTGATCAGCAAC CTGGTGGCGAGCCTCAAGGATACGGCCCAGCACATCCAGGACAAGATGATCGAGTATTTCACCCAGGCGGACCCCGACTA TGGCCGCCGCGTGCGTGAAGGGATCGCCCAAGCCCGCCAGAGTGACGCCCAGAAGAAGGCAGAGGCGGTGCAGCAGGCCG AAGAGCGCAGCCACGAGGCGCAGCCCTACTGA
Upstream 100 bases:
>100_bases GAAAAAGTCATAATGATTATGATTTTGGAGCTTAAGCACGGCGACAGCGGTGCCGCCCCGTCTCACCCTCACCCCAGCCA GGCAGCTGAACAGGAGACCT
Downstream 100 bases:
>100_bases GGCCTCGCTGCTCACCAAGGCTCGGCCCTCCTGGCGCGTGCCCGGATGGTGCCCTGCCGCTGCGAAAAGCCGGACCACCT GCTACCCTAAGGGAGAAGCA
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MSDQKQPKNTGIAGTAVEGMGSPADTRFAPGEQAQTLTTRQGHPVTNNQNLRTVGNRGPATLENYHFIEKLSHFDRERIP ERVVHARGAGAHGYFEAYGKVGDEPISRYTRAKLFQEPGKRTPVFVRFSTVGHGGHSPETLRDPRGFAVKFYTEDGNWDL VGNNLKVFFIRDAIKFPDLIHSQKPDPVTNIQSQERIFDFFCGTPEALHMITLLYSPWGIPASYRHMQGSGVNTYKWVND KGEAVLVKYHWEPLQGIRNLTQAEAEAIQAKNFNHATQDLYEAIERGDYPQWELLVQIMPDGEHPELDFDPLDDTKIWPR DQFPWLPVGRMTLNRNPENYFAEVEQAAFGTGVLVDGLDFSDDKMLQGRTFAYSDTQRYRIGPNYLQLPINAPKKHVATN QRDGQMTYRVDTAPGQNPHVNYEPSTLNGLSEAPRQAPDHTPYIAGNLVRQSIDRTNDFKQAGEQYRAFEDWERDELISN LVASLKDTAQHIQDKMIEYFTQADPDYGRRVREGIAQARQSDAQKKAEAVQQAEERSHEAQPY
Sequences:
>Translated_543_residues MSDQKQPKNTGIAGTAVEGMGSPADTRFAPGEQAQTLTTRQGHPVTNNQNLRTVGNRGPATLENYHFIEKLSHFDRERIP ERVVHARGAGAHGYFEAYGKVGDEPISRYTRAKLFQEPGKRTPVFVRFSTVGHGGHSPETLRDPRGFAVKFYTEDGNWDL VGNNLKVFFIRDAIKFPDLIHSQKPDPVTNIQSQERIFDFFCGTPEALHMITLLYSPWGIPASYRHMQGSGVNTYKWVND KGEAVLVKYHWEPLQGIRNLTQAEAEAIQAKNFNHATQDLYEAIERGDYPQWELLVQIMPDGEHPELDFDPLDDTKIWPR DQFPWLPVGRMTLNRNPENYFAEVEQAAFGTGVLVDGLDFSDDKMLQGRTFAYSDTQRYRIGPNYLQLPINAPKKHVATN QRDGQMTYRVDTAPGQNPHVNYEPSTLNGLSEAPRQAPDHTPYIAGNLVRQSIDRTNDFKQAGEQYRAFEDWERDELISN LVASLKDTAQHIQDKMIEYFTQADPDYGRRVREGIAQARQSDAQKKAEAVQQAEERSHEAQPY >Mature_542_residues SDQKQPKNTGIAGTAVEGMGSPADTRFAPGEQAQTLTTRQGHPVTNNQNLRTVGNRGPATLENYHFIEKLSHFDRERIPE RVVHARGAGAHGYFEAYGKVGDEPISRYTRAKLFQEPGKRTPVFVRFSTVGHGGHSPETLRDPRGFAVKFYTEDGNWDLV GNNLKVFFIRDAIKFPDLIHSQKPDPVTNIQSQERIFDFFCGTPEALHMITLLYSPWGIPASYRHMQGSGVNTYKWVNDK GEAVLVKYHWEPLQGIRNLTQAEAEAIQAKNFNHATQDLYEAIERGDYPQWELLVQIMPDGEHPELDFDPLDDTKIWPRD QFPWLPVGRMTLNRNPENYFAEVEQAAFGTGVLVDGLDFSDDKMLQGRTFAYSDTQRYRIGPNYLQLPINAPKKHVATNQ RDGQMTYRVDTAPGQNPHVNYEPSTLNGLSEAPRQAPDHTPYIAGNLVRQSIDRTNDFKQAGEQYRAFEDWERDELISNL VASLKDTAQHIQDKMIEYFTQADPDYGRRVREGIAQARQSDAQKKAEAVQQAEERSHEAQPY
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=503, Percent_Identity=44.1351888667992, Blast_Score=429, Evalue=1e-120, Organism=Escherichia coli, GI48994891, Length=426, Percent_Identity=45.7746478873239, Blast_Score=371, Evalue=1e-104, Organism=Caenorhabditis elegans, GI71998444, Length=491, Percent_Identity=43.7881873727088, Blast_Score=437, Evalue=1e-122, Organism=Caenorhabditis elegans, GI25147792, Length=490, Percent_Identity=42.4489795918367, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI25151141, Length=491, Percent_Identity=42.1588594704684, Blast_Score=425, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6320462, Length=498, Percent_Identity=38.9558232931727, Blast_Score=327, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6321525, Length=510, Percent_Identity=32.3529411764706, Blast_Score=263, Evalue=5e-71, Organism=Drosophila melanogaster, GI17981717, Length=491, Percent_Identity=44.1955193482688, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI19920968, Length=495, Percent_Identity=41.2121212121212, Blast_Score=402, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 61705; Mature: 61574
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQKQPKNTGIAGTAVEGMGSPADTRFAPGEQAQTLTTRQGHPVTNNQNLRTVGNRGPA CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCCC TLENYHFIEKLSHFDRERIPERVVHARGAGAHGYFEAYGKVGDEPISRYTRAKLFQEPGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC RTPVFVRFSTVGHGGHSPETLRDPRGFAVKFYTEDGNWDLVGNNLKVFFIRDAIKFPDLI CCCEEEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCEEEECCCEEEEEEECCHHCHHHH HSQKPDPVTNIQSQERIFDFFCGTPEALHMITLLYSPWGIPASYRHMQGSGVNTYKWVND HCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEECC KGEAVLVKYHWEPLQGIRNLTQAEAEAIQAKNFNHATQDLYEAIERGDYPQWELLVQIMP CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECC DGEHPELDFDPLDDTKIWPRDQFPWLPVGRMTLNRNPENYFAEVEQAAFGTGVLVDGLDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEECCCC SDDKMLQGRTFAYSDTQRYRIGPNYLQLPINAPKKHVATNQRDGQMTYRVDTAPGQNPHV CCCCCCCCCEEEECCCCCEEECCCEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCCCCC NYEPSTLNGLSEAPRQAPDHTPYIAGNLVRQSIDRTNDFKQAGEQYRAFEDWERDELISN CCCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVASLKDTAQHIQDKMIEYFTQADPDYGRRVREGIAQARQSDAQKKAEAVQQAEERSHEA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QPY CCC >Mature Secondary Structure SDQKQPKNTGIAGTAVEGMGSPADTRFAPGEQAQTLTTRQGHPVTNNQNLRTVGNRGPA CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCCC TLENYHFIEKLSHFDRERIPERVVHARGAGAHGYFEAYGKVGDEPISRYTRAKLFQEPGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC RTPVFVRFSTVGHGGHSPETLRDPRGFAVKFYTEDGNWDLVGNNLKVFFIRDAIKFPDLI CCCEEEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCEEEECCCEEEEEEECCHHCHHHH HSQKPDPVTNIQSQERIFDFFCGTPEALHMITLLYSPWGIPASYRHMQGSGVNTYKWVND HCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEECC KGEAVLVKYHWEPLQGIRNLTQAEAEAIQAKNFNHATQDLYEAIERGDYPQWELLVQIMP CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECC DGEHPELDFDPLDDTKIWPRDQFPWLPVGRMTLNRNPENYFAEVEQAAFGTGVLVDGLDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEECCCC SDDKMLQGRTFAYSDTQRYRIGPNYLQLPINAPKKHVATNQRDGQMTYRVDTAPGQNPHV CCCCCCCCCEEEECCCCCEEECCCEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCCCCC NYEPSTLNGLSEAPRQAPDHTPYIAGNLVRQSIDRTNDFKQAGEQYRAFEDWERDELISN CCCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVASLKDTAQHIQDKMIEYFTQADPDYGRRVREGIAQARQSDAQKKAEAVQQAEERSHEA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QPY CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]