Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
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Accession | NC_008010 |
Length | 574,127 |
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The map label for this gene is catD [H]
Identifier: 94971857
GI number: 94971857
Start: 103793
End: 104953
Strand: Direct
Name: catD [H]
Synonym: Dgeo_2388
Alternate gene names: 94971857
Gene position: 103793-104953 (Clockwise)
Preceding gene: 94971858
Following gene: 94971856
Centisome position: 18.08
GC content: 67.01
Gene sequence:
>1161_bases TTGACGTTTCTCGATACCGGTTCCCTTGTTCTGCACCTGCAATCCATTGGTTCCGAAGCCGCGTCGCCTCTGGTCTTCCT CAATCCCATCGGCAGCGATCTGCGTGTGTGGGACGAGGTCGCGGGTGAGCTGCGCTCTTCTTTCCGAATCATTCAGTACG ACCTGCGGGGTCAGGGCCTCTCGGACGTGCCTGGTGGTGAGTACTCCCTGGAACACCACGTGGCGGATCTCCTCGGACTG CTGGACGCGCTGGGCCTGGAGCAGGTTGCTCTGGTCGGCTGCTCGCTGGGGGGGGTCATTGCTCAGGCCTTGGCCCTCTC GCACCCGGCCCGGGTGGCGCGGCTTGTGCTGCTGGACACCCTGCCGCGCATCGGGACCGCTGAAAGCTGGCAGACCCGCA TCGCACAGGTGAGCGCTGAGGGCCTCCCTGCGCTGGCACCGACCCTGATTCGGCGCTGGTTTGCCCCCGCCTTCTTTCAG GAACAGCCCACCGCTGCCCACGGCTACACCACCCTTCTCGCCCGCAGTCCCCAGGACGGCTACCTCGGCAGTTGCGCCGC GCTGCGGGATGCTGACCTCACGGCACAGCTGCAGACCCTGCGGATCCCCACGCTGGTCCTGTGTGGCGAGCATGACATCA GCACCCCGCCTGACGCTTGCCGCGCCCTGGCCGACCAGATCGGCGCCCGCTTCGCGCTCATCCGCGGAGCCGCGCACCTG CCGATGGTGGAACGCCCGCACGAGGTCGCCCGGCTTCTGCGCGACTTCCTGGGAGAGAAGACGGCCACCGGCAGGTACGA CCAGGGCATGGCCGTTCGGCGCCGGGTCCTGGGCGACGCCCATGTCGACCGGGCGAATGCCGCTGTGACCGACCTCGACG GCGACTTCCAAACCTTCATCACCGAGTACGCCTGGGGTGGCCCGTGGTCCCGCCCCGGCCTCGACCTCCGTACCCGGCAC CTGCTGACCCTCGCCGTGCTCACGGCGTTGCTCCGCGAACACGAGTTGGAGATGCATGTCCGTGCGACGCGGAACACCGG CGTGACCGAGGACGATCTGCGTGAAGTGTTCCTCCAGGTGGCCGTCTATGCCGGGGTTCCTGTGGCCAACCGCGCCTTTC AGATCGCCAAGAGAGTCCTCTCGGAAAGGAATGATCCATGA
Upstream 100 bases:
>100_bases TTCCGAATAACAGAACAATGCCCTTGTCCCTGGAGCCGAAAGCCGGGAAGCTGAACCTACTTTTTCAGCGGTGTTGCCCT CTGCCCCAAGGAGTTGTCCT
Downstream 100 bases:
>100_bases CCCAGTCCCCACCGAAGACGCCAGAGACGGGAAGCGTTCACGCGCCACACCTTTACCCGCCATACACCAGCAGCGTGAAG CGCGCCCCACACGAGCGGCT
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTFLDTGSLVLHLQSIGSEAASPLVFLNPIGSDLRVWDEVAGELRSSFRIIQYDLRGQGLSDVPGGEYSLEHHVADLLGL LDALGLEQVALVGCSLGGVIAQALALSHPARVARLVLLDTLPRIGTAESWQTRIAQVSAEGLPALAPTLIRRWFAPAFFQ EQPTAAHGYTTLLARSPQDGYLGSCAALRDADLTAQLQTLRIPTLVLCGEHDISTPPDACRALADQIGARFALIRGAAHL PMVERPHEVARLLRDFLGEKTATGRYDQGMAVRRRVLGDAHVDRANAAVTDLDGDFQTFITEYAWGGPWSRPGLDLRTRH LLTLAVLTALLREHELEMHVRATRNTGVTEDDLREVFLQVAVYAGVPVANRAFQIAKRVLSERNDP
Sequences:
>Translated_386_residues MTFLDTGSLVLHLQSIGSEAASPLVFLNPIGSDLRVWDEVAGELRSSFRIIQYDLRGQGLSDVPGGEYSLEHHVADLLGL LDALGLEQVALVGCSLGGVIAQALALSHPARVARLVLLDTLPRIGTAESWQTRIAQVSAEGLPALAPTLIRRWFAPAFFQ EQPTAAHGYTTLLARSPQDGYLGSCAALRDADLTAQLQTLRIPTLVLCGEHDISTPPDACRALADQIGARFALIRGAAHL PMVERPHEVARLLRDFLGEKTATGRYDQGMAVRRRVLGDAHVDRANAAVTDLDGDFQTFITEYAWGGPWSRPGLDLRTRH LLTLAVLTALLREHELEMHVRATRNTGVTEDDLREVFLQVAVYAGVPVANRAFQIAKRVLSERNDP >Mature_385_residues TFLDTGSLVLHLQSIGSEAASPLVFLNPIGSDLRVWDEVAGELRSSFRIIQYDLRGQGLSDVPGGEYSLEHHVADLLGLL DALGLEQVALVGCSLGGVIAQALALSHPARVARLVLLDTLPRIGTAESWQTRIAQVSAEGLPALAPTLIRRWFAPAFFQE QPTAAHGYTTLLARSPQDGYLGSCAALRDADLTAQLQTLRIPTLVLCGEHDISTPPDACRALADQIGARFALIRGAAHLP MVERPHEVARLLRDFLGEKTATGRYDQGMAVRRRVLGDAHVDRANAAVTDLDGDFQTFITEYAWGGPWSRPGLDLRTRHL LTLAVLTALLREHELEMHVRATRNTGVTEDDLREVFLQVAVYAGVPVANRAFQIAKRVLSERNDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 42046; Mature: 41914
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLDTGSLVLHLQSIGSEAASPLVFLNPIGSDLRVWDEVAGELRSSFRIIQYDLRGQGL CCEECCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCC SDVPGGEYSLEHHVADLLGLLDALGLEQVALVGCSLGGVIAQALALSHPARVARLVLLDT CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LPRIGTAESWQTRIAQVSAEGLPALAPTLIRRWFAPAFFQEQPTAAHGYTTLLARSPQDG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCCCCCCHHHHEECCCCCC YLGSCAALRDADLTAQLQTLRIPTLVLCGEHDISTPPDACRALADQIGARFALIRGAAHL CCCCHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PMVERPHEVARLLRDFLGEKTATGRYDQGMAVRRRVLGDAHVDRANAAVTDLDGDFQTFI CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHH TEYAWGGPWSRPGLDLRTRHLLTLAVLTALLREHELEMHVRATRNTGVTEDDLREVFLQV HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH AVYAGVPVANRAFQIAKRVLSERNDP HHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TFLDTGSLVLHLQSIGSEAASPLVFLNPIGSDLRVWDEVAGELRSSFRIIQYDLRGQGL CEECCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCC SDVPGGEYSLEHHVADLLGLLDALGLEQVALVGCSLGGVIAQALALSHPARVARLVLLDT CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LPRIGTAESWQTRIAQVSAEGLPALAPTLIRRWFAPAFFQEQPTAAHGYTTLLARSPQDG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCCCCCCHHHHEECCCCCC YLGSCAALRDADLTAQLQTLRIPTLVLCGEHDISTPPDACRALADQIGARFALIRGAAHL CCCCHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PMVERPHEVARLLRDFLGEKTATGRYDQGMAVRRRVLGDAHVDRANAAVTDLDGDFQTFI CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHH TEYAWGGPWSRPGLDLRTRHLLTLAVLTALLREHELEMHVRATRNTGVTEDDLREVFLQV HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH AVYAGVPVANRAFQIAKRVLSERNDP HHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]