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The map label for this gene is pcaH [H]

Identifier: 94971856

GI number: 94971856

Start: 104950

End: 105675

Strand: Direct

Name: pcaH [H]

Synonym: Dgeo_2387

Alternate gene names: 94971856

Gene position: 104950-105675 (Clockwise)

Preceding gene: 94971857

Following gene: 94971855

Centisome position: 18.28

GC content: 66.12

Gene sequence:

>726_bases
ATGACCCAGTCCCCACCGAAGACGCCAGAGACGGGAAGCGTTCACGCGCCACACCTTTACCCGCCATACACCAGCAGCGT
GAAGCGCGCCCCACACGAGCGGCTGATCCCGCTGCCCGCTGCTCTGGAGAATCTGCATGGCCCGGTCTTTGGCACAGACC
GCCTGCGCCCCGATGACAACGACACCACCCGCAACGCCCGGGTCAATGGCGAGCCGCTGGGTGAGCGGATTCTTGTACGC
GGCCGACTGCTCGACAGCACCGGGCGCCCAGTGCGCGGGGCGCTGATCGAGACGTGGCAAGCAAATGCGGCTGGGCGCTA
CATCCACCAGCGGGACCGGCACGACGCGCCCCTGGACCCGAACTTCACCGGGACGGCCCGGATGCTGACCGACGAATACG
GCGAATACGAGCTGATCACCATCCGCCCGGGGGCCTATCCCTGGGGGAATCATCCCAATGCCTGGCGGCCCGCGCACATT
CACTTCAGCGTGTTCGGCACCAATTTCACCCAGCGGCTTGTGTCGCAGATGTACTTTCCGGGCGATCCCCTCCTCGCCCA
CGACCCGATCTATCAGGGCATTCCCGATGAGAAGGGGCGGCAGAGGCTGATCAGCCGCTTCGACCTGGCGCTCACGCAGC
CGAACTGGGCGCTGGGGTTCCGCTTCGATATCGTGCTGGGCGGCAGCGCACAGACCCCCTTCGAGGAGCCGGACCATGAC
CACTGA

Upstream 100 bases:

>100_bases
TGCGTGAAGTGTTCCTCCAGGTGGCCGTCTATGCCGGGGTTCCTGTGGCCAACCGCGCCTTTCAGATCGCCAAGAGAGTC
CTCTCGGAAAGGAATGATCC

Downstream 100 bases:

>100_bases
ACCGCGTCCCCGCCTCTCTCCGGAGACTTCGAACATTCCCGCGGACGCTTTCGGTCCATCCCCCAGTCAGACCGTCGGGC
CGTACTTTCACCAGGGGTTG

Product: protocatechuate 3,4-dioxygenase, beta subunit

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTQSPPKTPETGSVHAPHLYPPYTSSVKRAPHERLIPLPAALENLHGPVFGTDRLRPDDNDTTRNARVNGEPLGERILVR
GRLLDSTGRPVRGALIETWQANAAGRYIHQRDRHDAPLDPNFTGTARMLTDEYGEYELITIRPGAYPWGNHPNAWRPAHI
HFSVFGTNFTQRLVSQMYFPGDPLLAHDPIYQGIPDEKGRQRLISRFDLALTQPNWALGFRFDIVLGGSAQTPFEEPDHD
H

Sequences:

>Translated_241_residues
MTQSPPKTPETGSVHAPHLYPPYTSSVKRAPHERLIPLPAALENLHGPVFGTDRLRPDDNDTTRNARVNGEPLGERILVR
GRLLDSTGRPVRGALIETWQANAAGRYIHQRDRHDAPLDPNFTGTARMLTDEYGEYELITIRPGAYPWGNHPNAWRPAHI
HFSVFGTNFTQRLVSQMYFPGDPLLAHDPIYQGIPDEKGRQRLISRFDLALTQPNWALGFRFDIVLGGSAQTPFEEPDHD
H
>Mature_240_residues
TQSPPKTPETGSVHAPHLYPPYTSSVKRAPHERLIPLPAALENLHGPVFGTDRLRPDDNDTTRNARVNGEPLGERILVRG
RLLDSTGRPVRGALIETWQANAAGRYIHQRDRHDAPLDPNFTGTARMLTDEYGEYELITIRPGAYPWGNHPNAWRPAHIH
FSVFGTNFTQRLVSQMYFPGDPLLAHDPIYQGIPDEKGRQRLISRFDLALTQPNWALGFRFDIVLGGSAQTPFEEPDHDH

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 27160; Mature: 27029

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSPPKTPETGSVHAPHLYPPYTSSVKRAPHERLIPLPAALENLHGPVFGTDRLRPDDN
CCCCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCC
DTTRNARVNGEPLGERILVRGRLLDSTGRPVRGALIETWQANAAGRYIHQRDRHDAPLDP
CCCCCCEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
NFTGTARMLTDEYGEYELITIRPGAYPWGNHPNAWRPAHIHFSVFGTNFTQRLVSQMYFP
CCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCC
GDPLLAHDPIYQGIPDEKGRQRLISRFDLALTQPNWALGFRFDIVLGGSAQTPFEEPDHD
CCCCEECCCHHCCCCCHHHHHHHHHHHHHEEECCCEEEEEEEEEEECCCCCCCCCCCCCC
H
C
>Mature Secondary Structure 
TQSPPKTPETGSVHAPHLYPPYTSSVKRAPHERLIPLPAALENLHGPVFGTDRLRPDDN
CCCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCC
DTTRNARVNGEPLGERILVRGRLLDSTGRPVRGALIETWQANAAGRYIHQRDRHDAPLDP
CCCCCCEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
NFTGTARMLTDEYGEYELITIRPGAYPWGNHPNAWRPAHIHFSVFGTNFTQRLVSQMYFP
CCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCC
GDPLLAHDPIYQGIPDEKGRQRLISRFDLALTQPNWALGFRFDIVLGGSAQTPFEEPDHD
CCCCEECCCHHCCCCCHHHHHHHHHHHHHEEECCCEEEEEEEEEEECCCCCCCCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]