Click here to switch to the map view.

The map label for this gene is asfB

Identifier: 94313259

GI number: 94313259

Start: 927881

End: 928216

Strand: Reverse

Name: asfB

Synonym: Rmet_4334

Alternate gene names: NA

Gene position: 928216-927881 (Counterclockwise)

Preceding gene: 94313260

Following gene: 94313253

Centisome position: 35.98

GC content: 61.61

Gene sequence:

>336_bases
ATGATCGAACTCATTAGCGAAAGCCGCTGCACTGGCTGCAACATCTGCGTCCGCGTCTGCCCGGTCAACGTGTTCGATGC
CGTGCCTCAGGCCGCACCGACCATTGCCCGACAGGCCGACTGCCAGACCTGCTTCATGTGCGAGGCCTGGTGCCCGGAGG
ATGCCATGTTCGTCTCTCCCAACGCCGAGGCTTCGACCGGCGTGAGCGAGCAATCGCTGGTGCGCGAGGAACTGCTGGGG
AGCTACCGCAAAAACATTGGCTGGAATCGCGGATTTCCGGAGAAACGGGGCGTAGACGACTCATATCAACTCCTCAGTAT
GCCGGGTGCCCGCTGA

Upstream 100 bases:

>100_bases
GCGGAGGATTGGACCAGGTCTGGGCCCGTCCGTTGGCCTATGACACTCAAGGTGGTCCGCGATCGGCGCAAGCCAGGGCC
GAGCAGGAAGGTATTGCCGC

Downstream 100 bases:

>100_bases
GCGAGGGAGTCGCTCGCAGCCTGCGACTGCTACCGCTATCGGCGGACCAGGGACTGGCAAGGGCCAGTCCGGCTCCCGGG
CCTCACTCAAGCCGCTTCGG

Product: 4Fe-4S ferredoxin

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin; Ferrodoxin; Ferrodoxin Homolog; 4Fe-4S Ferredoxin Protein; Fe-S Ferredoxin-Type Protein; Photosystem I Iron-Sulfur Center; Ferredoxin ASFB IRON-Sulfur Protein; Electron Transport Complex RnfABCDGE Type B

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MIELISESRCTGCNICVRVCPVNVFDAVPQAAPTIARQADCQTCFMCEAWCPEDAMFVSPNAEASTGVSEQSLVREELLG
SYRKNIGWNRGFPEKRGVDDSYQLLSMPGAR

Sequences:

>Translated_111_residues
MIELISESRCTGCNICVRVCPVNVFDAVPQAAPTIARQADCQTCFMCEAWCPEDAMFVSPNAEASTGVSEQSLVREELLG
SYRKNIGWNRGFPEKRGVDDSYQLLSMPGAR
>Mature_111_residues
MIELISESRCTGCNICVRVCPVNVFDAVPQAAPTIARQADCQTCFMCEAWCPEDAMFVSPNAEASTGVSEQSLVREELLG
SYRKNIGWNRGFPEKRGVDDSYQLLSMPGAR

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12225; Mature: 12225

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELISESRCTGCNICVRVCPVNVFDAVPQAAPTIARQADCQTCFMCEAWCPEDAMFVSP
CCCCCCCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCEEECC
NAEASTGVSEQSLVREELLGSYRKNIGWNRGFPEKRGVDDSYQLLSMPGAR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MIELISESRCTGCNICVRVCPVNVFDAVPQAAPTIARQADCQTCFMCEAWCPEDAMFVSP
CCCCCCCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCEEECC
NAEASTGVSEQSLVREELLGSYRKNIGWNRGFPEKRGVDDSYQLLSMPGAR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA