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The map label for this gene is yfhM [H]

Identifier: 94313253

GI number: 94313253

Start: 921650

End: 922624

Strand: Reverse

Name: yfhM [H]

Synonym: Rmet_4328

Alternate gene names: 94313253

Gene position: 922624-921650 (Counterclockwise)

Preceding gene: 94313259

Following gene: 94313252

Centisome position: 35.76

GC content: 58.56

Gene sequence:

>975_bases
ATGAGCGCCTACCGTCAGAACTTTATTGAAGCCAACGGCATCCGACTGCATGTCGCAGAGCAAGGCGAGGGGCCCTTGGT
GCTGCTTTGCCACGGGTTTCCTGAGACATCGCATGCTTGGCGACATCAACTCGCAGCACTGGCGCAAGCTGGTTTTCACG
CTGTCGCGCCAGACTTGCGCGGATATGGGTTGAGCGACTGCCCTGAAGGTATTGGGCAATACACGACGCTTGACGTTGTC
GGCGATCTCGTTGCGCTCGTTGGCGTACTCGGCGAAAGCGAAGGGGTCATCGTCGGAAACGATTGGGGTGCGACTATTGC
GTGGCAGGCGGCAATGCTCCGGCCCGACCGATTTCGGGGTGTCGTGGCGCTCGGCGTTCCGATGATGGGCCGCGCGCCAT
TTGCGCCAAGTCGCCTGTTTCCGCAGAACGACCAAGCGTGGTTTTACACCCATTACTTCTCCAAACCTGGACTCGCCGAA
AGCGAGCTTAAGCGAGACGTTGCTGCGACCCTTCGCAAGATCTACTTTTCGGCCTCGGGCGATGTCGGCGTTCGCGGCGC
CAGCACTCCGAACCCGTTCGGACTGGTACCCCGGGGCAAGCAATATCTCGATGCCCTCGGTGATTTCCCGTCATTGCCGG
ATTGGCTTGGCTCCTCCGATCTCGAAGCGTTCGTACGCGCCTTCAATGTCTCTAGCTTTCGAGGCGGCCTGAACTACTAC
CGGAACCTCGACAGAAACTGGGAAATGCAAGCAGCGTTTGAGGGGCTTCGCATCGAAGTGCCTGCCCTTTACCTTGTCGG
CGAAAGAGACACAGGGCTCGCTATGCCTGGCATGCGTGAAATCATCGATGCCATGCCCAAAATCGTACCAAAGCTGCGCA
AGTCTGATGTGGTACCGACGGCAGGACACTGGTTACCCCAAGAAGCACCGGACGTCGTCAACGCAGCGTTAGTCGAGTTT
CTCCGGGAGCTTTGA

Upstream 100 bases:

>100_bases
GGGTGTCGAATCGCATGAAAGCAGAACTATTGAGTTTCCGTAATGTTTGATGTTACGCTAATGCAATGCGTGCTGTAAAC
GACCATGATTCCGAGCCACG

Downstream 100 bases:

>100_bases
CACCATCGATCATCGCTGTCCCTTCCTGGCGCGTCACCGGACATTGCCAGCTCAGCAACAAGGGACTACTACGGGTCGGT
CAGGCACTGTCATTGGGAGA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSAYRQNFIEANGIRLHVAEQGEGPLVLLCHGFPETSHAWRHQLAALAQAGFHAVAPDLRGYGLSDCPEGIGQYTTLDVV
GDLVALVGVLGESEGVIVGNDWGATIAWQAAMLRPDRFRGVVALGVPMMGRAPFAPSRLFPQNDQAWFYTHYFSKPGLAE
SELKRDVAATLRKIYFSASGDVGVRGASTPNPFGLVPRGKQYLDALGDFPSLPDWLGSSDLEAFVRAFNVSSFRGGLNYY
RNLDRNWEMQAAFEGLRIEVPALYLVGERDTGLAMPGMREIIDAMPKIVPKLRKSDVVPTAGHWLPQEAPDVVNAALVEF
LREL

Sequences:

>Translated_324_residues
MSAYRQNFIEANGIRLHVAEQGEGPLVLLCHGFPETSHAWRHQLAALAQAGFHAVAPDLRGYGLSDCPEGIGQYTTLDVV
GDLVALVGVLGESEGVIVGNDWGATIAWQAAMLRPDRFRGVVALGVPMMGRAPFAPSRLFPQNDQAWFYTHYFSKPGLAE
SELKRDVAATLRKIYFSASGDVGVRGASTPNPFGLVPRGKQYLDALGDFPSLPDWLGSSDLEAFVRAFNVSSFRGGLNYY
RNLDRNWEMQAAFEGLRIEVPALYLVGERDTGLAMPGMREIIDAMPKIVPKLRKSDVVPTAGHWLPQEAPDVVNAALVEF
LREL
>Mature_323_residues
SAYRQNFIEANGIRLHVAEQGEGPLVLLCHGFPETSHAWRHQLAALAQAGFHAVAPDLRGYGLSDCPEGIGQYTTLDVVG
DLVALVGVLGESEGVIVGNDWGATIAWQAAMLRPDRFRGVVALGVPMMGRAPFAPSRLFPQNDQAWFYTHYFSKPGLAES
ELKRDVAATLRKIYFSASGDVGVRGASTPNPFGLVPRGKQYLDALGDFPSLPDWLGSSDLEAFVRAFNVSSFRGGLNYYR
NLDRNWEMQAAFEGLRIEVPALYLVGERDTGLAMPGMREIIDAMPKIVPKLRKSDVVPTAGHWLPQEAPDVVNAALVEFL
REL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI27597073, Length=308, Percent_Identity=33.7662337662338, Blast_Score=191, Evalue=6e-49,
Organism=Homo sapiens, GI218777840, Length=323, Percent_Identity=32.5077399380805, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI13376164, Length=323, Percent_Identity=32.5077399380805, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI218777837, Length=322, Percent_Identity=27.0186335403727, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17554012, Length=320, Percent_Identity=26.25, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17562298, Length=331, Percent_Identity=24.4712990936556, Blast_Score=108, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 35454; Mature: 35323

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYRQNFIEANGIRLHVAEQGEGPLVLLCHGFPETSHAWRHQLAALAQAGFHAVAPDLR
CCHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCC
GYGLSDCPEGIGQYTTLDVVGDLVALVGVLGESEGVIVGNDWGATIAWQAAMLRPDRFRG
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCHHHCC
VVALGVPMMGRAPFAPSRLFPQNDQAWFYTHYFSKPGLAESELKRDVAATLRKIYFSASG
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
DVGVRGASTPNPFGLVPRGKQYLDALGDFPSLPDWLGSSDLEAFVRAFNVSSFRGGLNYY
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHH
RNLDRNWEMQAAFEGLRIEVPALYLVGERDTGLAMPGMREIIDAMPKIVPKLRKSDVVPT
HCCCCCCCHHHHHCCCEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AGHWLPQEAPDVVNAALVEFLREL
CCCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SAYRQNFIEANGIRLHVAEQGEGPLVLLCHGFPETSHAWRHQLAALAQAGFHAVAPDLR
CHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCC
GYGLSDCPEGIGQYTTLDVVGDLVALVGVLGESEGVIVGNDWGATIAWQAAMLRPDRFRG
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCHHHCC
VVALGVPMMGRAPFAPSRLFPQNDQAWFYTHYFSKPGLAESELKRDVAATLRKIYFSASG
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
DVGVRGASTPNPFGLVPRGKQYLDALGDFPSLPDWLGSSDLEAFVRAFNVSSFRGGLNYY
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHH
RNLDRNWEMQAAFEGLRIEVPALYLVGERDTGLAMPGMREIIDAMPKIVPKLRKSDVVPT
HCCCCCCCHHHHHCCCEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AGHWLPQEAPDVVNAALVEFLREL
CCCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]