Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93007274
Identifier: 93007274
GI number: 93007274
Start: 3027356
End: 3028741
Strand: Reverse
Name: 93007274
Synonym: Pcryo_2450
Alternate gene names: NA
Gene position: 3028741-3027356 (Counterclockwise)
Preceding gene: 93007275
Following gene: 93007271
Centisome position: 98.98
GC content: 41.05
Gene sequence:
>1386_bases ATGACTGAACAGAAGGTAAATATAGAAATAATCTCAATTGTGGATTTTCCGCAAGGCAGTCCATTACCTTATAGCGTGCT TGACGCAACGCATACTAATGCTGCCTATCCTGAGAAAAATTTAGAAATACGCGGTGGCGGTTATGGTTCAGATGCGGCGG CACATCCAAGCAATGCTAATCAATTCTATGTACTTACCGATCGAGGTCCCAATGCCGACTTTGATGGTATTGCTGGTAAA GGTAAGCAGTTTTTAGTGCCCAATTATACGCCGTCTATTGGATTGTTTGAGTTACAAGCTGATGGCAAAATCATCAAGAT AAAAGACATTGTGCTTAAAGATAGCAATGGCAATCCTATCTCTGGACTACCGAATCCAAAAGCCTTTGGCGGTACCAATG AAGTACCTTACGATATCAATGGTCAGCCGATGACGGTGAATCCAGATTTACCGTTTGATGAAGTGACCAACCCCATTAAA AGTAATATCAATGGCTTAGATCCCGAAGGACTTGCCGCGCTCAAAGATGGCAGTTTTTGGATCAGCGATGAATATGGTCC ACATCTTGTCCACTATGACGCGGATGGGGTGGAAATTGCCCGTATCAATCCTTTTGCACATGACGAACGCAATAATGTGT TTATTGATGGTAAGCAGGTGTTATTACCGGCAGAGTTTACCAAGCGCCGTGCCAATCGTGGTATGGAAGCATTAACTATA ACGCCAGACCAGACTACGCTTGTAGGTATCATGGAGTCCTCTATGGACAATCCTGATAAATCGGGTCGTGGCTCTAGTTT GGTTCGTATCGTCATTATCAACTTAGTTTCAGGGAAAATAGAGCAATATTTATATCGTCTTGATATTGCAGAGCACGTGG CATCAGGGATAGTCGCTATCAATGAACATGAATTTTATCTCATTGAGCATGGCCGCAAGTTTCCTTTACAAGATAAATCG GCAAAAAAACTTATTTATAAAATAAATATCTCTCAGGCAACAGATATTGAAACCATTATCAGTGCTGATAATCCACATAT CATCCAACAAAATGATACTTTCGGTTTGACTATTGACGGTCAAACGCTCGAGCAATTGATAGCAGAAAACGAAGCAAGCT GGCAACTACTCGAAAAGCTAGCTATCAAGCCTGTTAAAAAAACTTTGGTCGTCGATGTGCTTGCTACTCTAGATTATCCG CATGATAAGCTTGAAGGATTATGGTTACGCCAAGATGGCTCGTTAGGTTTACTCAATGATGATGATTTTGCGCTGACAGA TACAGAGATAGTGGATGCAAAAAGCACGATTGAACAAAAATATCTAGATAAAGAAAAAACCATAGAGGATGCCAATCGAT TATATCTTGTGATGCCTACTGCATAA
Upstream 100 bases:
>100_bases TATGCTAAGCACTGGTTATTTTTTTGCCTTTAATTTATCTATCATTTTTTATGAAATACCGTTTTTGAATACTAAGAATA TTGAGATAAGGAAAACGATA
Downstream 100 bases:
>100_bases AAACGGTCTCTAATAATAAGACATTACATTTATCACTAACCAAAAAAAGACCTCAATCGAGGTCTTTTTTATTATTTATA TTTTAGAGGCTAAGGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTEQKVNIEIISIVDFPQGSPLPYSVLDATHTNAAYPEKNLEIRGGGYGSDAAAHPSNANQFYVLTDRGPNADFDGIAGK GKQFLVPNYTPSIGLFELQADGKIIKIKDIVLKDSNGNPISGLPNPKAFGGTNEVPYDINGQPMTVNPDLPFDEVTNPIK SNINGLDPEGLAALKDGSFWISDEYGPHLVHYDADGVEIARINPFAHDERNNVFIDGKQVLLPAEFTKRRANRGMEALTI TPDQTTLVGIMESSMDNPDKSGRGSSLVRIVIINLVSGKIEQYLYRLDIAEHVASGIVAINEHEFYLIEHGRKFPLQDKS AKKLIYKINISQATDIETIISADNPHIIQQNDTFGLTIDGQTLEQLIAENEASWQLLEKLAIKPVKKTLVVDVLATLDYP HDKLEGLWLRQDGSLGLLNDDDFALTDTEIVDAKSTIEQKYLDKEKTIEDANRLYLVMPTA
Sequences:
>Translated_461_residues MTEQKVNIEIISIVDFPQGSPLPYSVLDATHTNAAYPEKNLEIRGGGYGSDAAAHPSNANQFYVLTDRGPNADFDGIAGK GKQFLVPNYTPSIGLFELQADGKIIKIKDIVLKDSNGNPISGLPNPKAFGGTNEVPYDINGQPMTVNPDLPFDEVTNPIK SNINGLDPEGLAALKDGSFWISDEYGPHLVHYDADGVEIARINPFAHDERNNVFIDGKQVLLPAEFTKRRANRGMEALTI TPDQTTLVGIMESSMDNPDKSGRGSSLVRIVIINLVSGKIEQYLYRLDIAEHVASGIVAINEHEFYLIEHGRKFPLQDKS AKKLIYKINISQATDIETIISADNPHIIQQNDTFGLTIDGQTLEQLIAENEASWQLLEKLAIKPVKKTLVVDVLATLDYP HDKLEGLWLRQDGSLGLLNDDDFALTDTEIVDAKSTIEQKYLDKEKTIEDANRLYLVMPTA >Mature_460_residues TEQKVNIEIISIVDFPQGSPLPYSVLDATHTNAAYPEKNLEIRGGGYGSDAAAHPSNANQFYVLTDRGPNADFDGIAGKG KQFLVPNYTPSIGLFELQADGKIIKIKDIVLKDSNGNPISGLPNPKAFGGTNEVPYDINGQPMTVNPDLPFDEVTNPIKS NINGLDPEGLAALKDGSFWISDEYGPHLVHYDADGVEIARINPFAHDERNNVFIDGKQVLLPAEFTKRRANRGMEALTIT PDQTTLVGIMESSMDNPDKSGRGSSLVRIVIINLVSGKIEQYLYRLDIAEHVASGIVAINEHEFYLIEHGRKFPLQDKSA KKLIYKINISQATDIETIISADNPHIIQQNDTFGLTIDGQTLEQLIAENEASWQLLEKLAIKPVKKTLVVDVLATLDYPH DKLEGLWLRQDGSLGLLNDDDFALTDTEIVDAKSTIEQKYLDKEKTIEDANRLYLVMPTA
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50835; Mature: 50704
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQKVNIEIISIVDFPQGSPLPYSVLDATHTNAAYPEKNLEIRGGGYGSDAAAHPSNAN CCCCEEEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC QFYVLTDRGPNADFDGIAGKGKQFLVPNYTPSIGLFELQADGKIIKIKDIVLKDSNGNPI EEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCC SGLPNPKAFGGTNEVPYDINGQPMTVNPDLPFDEVTNPIKSNINGLDPEGLAALKDGSFW CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCHHHHCCCCCCCCCCEEEECCCEE ISDEYGPHLVHYDADGVEIARINPFAHDERNNVFIDGKQVLLPAEFTKRRANRGMEALTI EECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEECCCEEEECHHHHHHHHHCCCEEEEE TPDQTTLVGIMESSMDNPDKSGRGSSLVRIVIINLVSGKIEQYLYRLDIAEHVASGIVAI CCCCCEEEEEHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEE NEHEFYLIEHGRKFPLQDKSAKKLIYKINISQATDIETIISADNPHIIQQNDTFGLTIDG ECCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEECH QTLEQLIAENEASWQLLEKLAIKPVKKTLVVDVLATLDYPHDKLEGLWLRQDGSLGLLND HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCEEEECC DDFALTDTEIVDAKSTIEQKYLDKEKTIEDANRLYLVMPTA CCCEEECCEEECCHHHHHHHHCCHHHHHCCCCEEEEEEECC >Mature Secondary Structure TEQKVNIEIISIVDFPQGSPLPYSVLDATHTNAAYPEKNLEIRGGGYGSDAAAHPSNAN CCCEEEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC QFYVLTDRGPNADFDGIAGKGKQFLVPNYTPSIGLFELQADGKIIKIKDIVLKDSNGNPI EEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCC SGLPNPKAFGGTNEVPYDINGQPMTVNPDLPFDEVTNPIKSNINGLDPEGLAALKDGSFW CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCHHHHCCCCCCCCCCEEEECCCEE ISDEYGPHLVHYDADGVEIARINPFAHDERNNVFIDGKQVLLPAEFTKRRANRGMEALTI EECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEECCCEEEECHHHHHHHHHCCCEEEEE TPDQTTLVGIMESSMDNPDKSGRGSSLVRIVIINLVSGKIEQYLYRLDIAEHVASGIVAI CCCCCEEEEEHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEE NEHEFYLIEHGRKFPLQDKSAKKLIYKINISQATDIETIISADNPHIIQQNDTFGLTIDG ECCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEECH QTLEQLIAENEASWQLLEKLAIKPVKKTLVVDVLATLDYPHDKLEGLWLRQDGSLGLLND HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCEEEECC DDFALTDTEIVDAKSTIEQKYLDKEKTIEDANRLYLVMPTA CCCEEECCEEECCHHHHHHHHCCHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA