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The map label for this gene is qmcA [H]

Identifier: 93007275

GI number: 93007275

Start: 3028897

End: 3029757

Strand: Reverse

Name: qmcA [H]

Synonym: Pcryo_2451

Alternate gene names: 93007275

Gene position: 3029757-3028897 (Counterclockwise)

Preceding gene: 93007276

Following gene: 93007274

Centisome position: 99.02

GC content: 44.83

Gene sequence:

>861_bases
ATGGAAAGCTTTAGCATTGTTATGGTGGTTTTGGTTGCACTGGTAGTCTTTACCGTGTTTAAAGGTGTGCGAATCGTACC
ACAAGGGTATAAATGGGTGGTACAGCGCTTAGGGAAATATAGCCAAACGTTAGAACCAGGTCTAAACCTTATTATCCCTT
ATGTCGATGATGTTTCTTACAAAGTAACGACCAAAGATATCGTCCTTGATATTCCGTCACAAGAAGTGATTACCCGCGAT
AACGTAGTGATTATCGCTAATGCTGTGGCTTATATTAATATTATTCGCCCTGATAAAGCGGTCTATGGCATCGAAGATTA
TGAGTATGGTATCCGTAATCTGGTACAAACGTCTTTACGTTCAATCATCGGTGAGATGGATCTTGATAGTGCCTTATCTA
GCCGTGATGAAATAAAAATGAAGCTAAAGCATGCCATCTCAGAAGATATTGCAGATTGGGGTATCACGTTAAAGACAGTA
GAGATTCAAGACATTAACCCCTCGCAAACCATGCAAGCATCAATGGAAGAACAGGCAGCGGCAGAGCGTCTACGCCGAGC
GACAGTGACCCGTGCTGATGGTCAAAAGCAAGCGGCTATCTTAGAAGCAGATGGGCGTTTAGAGGCCTCACGCCGTGACG
CTGAGGCGCAGGTGGTACTGGCGAAAGGCTCAGAGGAGTCTATCCGTCTAATCACTGCGGCGATGGGTACGGAAGAGATG
CCGATTGTCTACTTACTTGGCGAGCAGTATATTAAAGCGATTCGTCAGCTGGCTGAGTCTGACAACTCAAAAATGGTGGT
ATTACCTGCTGACATTCTAAGTACCGTAAAAGGCATGGTCGGTGATAAGCTTAAGGTTTAA

Upstream 100 bases:

>100_bases
AGTGGTAACAGATATCGTTGGTAACGAGCTGATTGTGAGTAGCATGACATCGAAGGCAGCTGTGAACCAAAATATGCGCG
TATAATAATAAGGATAAATT

Downstream 100 bases:

>100_bases
GCAGCTGTGCTTTGACCACATGCTATAAGCACAACGTATAAAAATAGCCAGTGAGTATGCTAAGCACTGGTTATTTTTTT
GCCTTTAATTTATCTATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MESFSIVMVVLVALVVFTVFKGVRIVPQGYKWVVQRLGKYSQTLEPGLNLIIPYVDDVSYKVTTKDIVLDIPSQEVITRD
NVVIIANAVAYINIIRPDKAVYGIEDYEYGIRNLVQTSLRSIIGEMDLDSALSSRDEIKMKLKHAISEDIADWGITLKTV
EIQDINPSQTMQASMEEQAAAERLRRATVTRADGQKQAAILEADGRLEASRRDAEAQVVLAKGSEESIRLITAAMGTEEM
PIVYLLGEQYIKAIRQLAESDNSKMVVLPADILSTVKGMVGDKLKV

Sequences:

>Translated_286_residues
MESFSIVMVVLVALVVFTVFKGVRIVPQGYKWVVQRLGKYSQTLEPGLNLIIPYVDDVSYKVTTKDIVLDIPSQEVITRD
NVVIIANAVAYINIIRPDKAVYGIEDYEYGIRNLVQTSLRSIIGEMDLDSALSSRDEIKMKLKHAISEDIADWGITLKTV
EIQDINPSQTMQASMEEQAAAERLRRATVTRADGQKQAAILEADGRLEASRRDAEAQVVLAKGSEESIRLITAAMGTEEM
PIVYLLGEQYIKAIRQLAESDNSKMVVLPADILSTVKGMVGDKLKV
>Mature_286_residues
MESFSIVMVVLVALVVFTVFKGVRIVPQGYKWVVQRLGKYSQTLEPGLNLIIPYVDDVSYKVTTKDIVLDIPSQEVITRD
NVVIIANAVAYINIIRPDKAVYGIEDYEYGIRNLVQTSLRSIIGEMDLDSALSSRDEIKMKLKHAISEDIADWGITLKTV
EIQDINPSQTMQASMEEQAAAERLRRATVTRADGQKQAAILEADGRLEASRRDAEAQVVLAKGSEESIRLITAAMGTEEM
PIVYLLGEQYIKAIRQLAESDNSKMVVLPADILSTVKGMVGDKLKV

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=277, Percent_Identity=34.6570397111913, Blast_Score=160, Evalue=9e-40,
Organism=Homo sapiens, GI21686995, Length=285, Percent_Identity=29.1228070175439, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI221316744, Length=285, Percent_Identity=28.4210526315789, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI38016911, Length=284, Percent_Identity=28.5211267605634, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI7657615, Length=180, Percent_Identity=23.8888888888889, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1786697, Length=288, Percent_Identity=36.1111111111111, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1790616, Length=198, Percent_Identity=28.2828282828283, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32564147, Length=286, Percent_Identity=33.2167832167832, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17569493, Length=201, Percent_Identity=32.8358208955224, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI193209764, Length=201, Percent_Identity=32.8358208955224, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17569497, Length=253, Percent_Identity=28.0632411067194, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17569499, Length=206, Percent_Identity=30.5825242718447, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71989955, Length=160, Percent_Identity=31.875, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71989948, Length=160, Percent_Identity=31.875, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17570459, Length=205, Percent_Identity=30.2439024390244, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71987621, Length=276, Percent_Identity=25.7246376811594, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71987612, Length=201, Percent_Identity=28.3582089552239, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25153583, Length=200, Percent_Identity=28, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32566490, Length=193, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193210507, Length=193, Percent_Identity=26.4248704663212, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570161, Length=193, Percent_Identity=26.4248704663212, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17542664, Length=164, Percent_Identity=27.4390243902439, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71989963, Length=124, Percent_Identity=32.258064516129, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45550506, Length=281, Percent_Identity=33.0960854092527, Blast_Score=155, Evalue=2e-38,
Organism=Drosophila melanogaster, GI18860517, Length=198, Percent_Identity=31.8181818181818, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281361631, Length=195, Percent_Identity=27.6923076923077, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281361633, Length=195, Percent_Identity=27.6923076923077, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI45556022, Length=209, Percent_Identity=31.1004784688995, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI21356845, Length=194, Percent_Identity=25.7731958762887, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI62484448, Length=200, Percent_Identity=30.5, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI62484274, Length=200, Percent_Identity=30.5, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24657857, Length=200, Percent_Identity=30.5, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI281365664, Length=200, Percent_Identity=30.5, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573263, Length=198, Percent_Identity=29.2929292929293, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281361635, Length=132, Percent_Identity=28.7878787878788, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 31703; Mature: 31703

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFSIVMVVLVALVVFTVFKGVRIVPQGYKWVVQRLGKYSQTLEPGLNLIIPYVDDVSY
CCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEE
KVTTKDIVLDIPSQEVITRDNVVIIANAVAYINIIRPDKAVYGIEDYEYGIRNLVQTSLR
EEEECEEEEECCCCHHEECCCEEEEEEEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHH
SIIGEMDLDSALSSRDEIKMKLKHAISEDIADWGITLKTVEIQDINPSQTMQASMEEQAA
HHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH
AERLRRATVTRADGQKQAAILEADGRLEASRRDAEAQVVLAKGSEESIRLITAAMGTEEM
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCC
PIVYLLGEQYIKAIRQLAESDNSKMVVLPADILSTVKGMVGDKLKV
CEEEEHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MESFSIVMVVLVALVVFTVFKGVRIVPQGYKWVVQRLGKYSQTLEPGLNLIIPYVDDVSY
CCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEE
KVTTKDIVLDIPSQEVITRDNVVIIANAVAYINIIRPDKAVYGIEDYEYGIRNLVQTSLR
EEEECEEEEECCCCHHEECCCEEEEEEEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHH
SIIGEMDLDSALSSRDEIKMKLKHAISEDIADWGITLKTVEIQDINPSQTMQASMEEQAA
HHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH
AERLRRATVTRADGQKQAAILEADGRLEASRRDAEAQVVLAKGSEESIRLITAAMGTEEM
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCC
PIVYLLGEQYIKAIRQLAESDNSKMVVLPADILSTVKGMVGDKLKV
CEEEEHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]