Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is hisB [H]
Identifier: 93007267
GI number: 93007267
Start: 3017829
End: 3018503
Strand: Reverse
Name: hisB [H]
Synonym: Pcryo_2443
Alternate gene names: 93007267
Gene position: 3018503-3017829 (Counterclockwise)
Preceding gene: 93007271
Following gene: 93007266
Centisome position: 98.65
GC content: 44.15
Gene sequence:
>675_bases ATGACCGCCAATTTAACGACGACAGCCAATATACCCAATACAGCTGAGCAAGATCCTACGCAAAAACTAAATTTACATGG TCGCCCTGAACGTATCGCGACTGTTGAGCGTATTACTGCTGAGACCCAAGTGACCTGTACGGTCAATCTTGATGGTACAG GGCAAGGTACTGTGGACACTGGCGTCCCGTTTTTGGATCATATGATTGACCAAATCAAGCGTCACGGTTTGTTTGACTTA GACATCAAATGTACCGGTGATACTTTCATCGATGATCACCACAGTGTTGAAGATACAGGCATTACGCTTGGTCAAGCATT TAACAAAGCATTAGGTGATAAAAAAGGTATCCGTCGTTATGGGCATTTTTACGCGCCACTAGACGAAGCATTGACGCGTG CGGTTGTTGATTTATCTGGTCGTCCAGGTCTGCATATGGATATTCCCTTTACGCGCTCGCATGTCGGCACTTTTGATGTC GATTTATTTAGCGAATTCTTCTATGGTTTTGTGAATCATTCGTGGATGACCGTGCATTTAGATAATCTAAAAGGCAAAAA CAGTCATCATCAAATCGAATCTACCTTTAAAGCCTTTGCTCGTGCGCTACGTATGGCGTGTGAATACGATGAACGTGCGC TAAATACCTTGCCATCGACCAAAGAGGCGTTTTAG
Upstream 100 bases:
>100_bases TAGCCTGATTGTTTTATTATCTATTTTAGACGCTAGTAAGAATATATTGGGCATTTTTCGCCCTATTTTATTGACCGCTT TTCATTTATAGAGAGTAGCC
Downstream 100 bases:
>100_bases ATGAGTCGTGCCACAAAAATTGCACTATTAGATTATGGTATGGGTAACTTGCACTCAGCCAGCAAAGCATTATCAGCGGT CGGGGCAGAAGTCTCTATCA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTANLTTTANIPNTAEQDPTQKLNLHGRPERIATVERITAETQVTCTVNLDGTGQGTVDTGVPFLDHMIDQIKRHGLFDL DIKCTGDTFIDDHHSVEDTGITLGQAFNKALGDKKGIRRYGHFYAPLDEALTRAVVDLSGRPGLHMDIPFTRSHVGTFDV DLFSEFFYGFVNHSWMTVHLDNLKGKNSHHQIESTFKAFARALRMACEYDERALNTLPSTKEAF
Sequences:
>Translated_224_residues MTANLTTTANIPNTAEQDPTQKLNLHGRPERIATVERITAETQVTCTVNLDGTGQGTVDTGVPFLDHMIDQIKRHGLFDL DIKCTGDTFIDDHHSVEDTGITLGQAFNKALGDKKGIRRYGHFYAPLDEALTRAVVDLSGRPGLHMDIPFTRSHVGTFDV DLFSEFFYGFVNHSWMTVHLDNLKGKNSHHQIESTFKAFARALRMACEYDERALNTLPSTKEAF >Mature_223_residues TANLTTTANIPNTAEQDPTQKLNLHGRPERIATVERITAETQVTCTVNLDGTGQGTVDTGVPFLDHMIDQIKRHGLFDLD IKCTGDTFIDDHHSVEDTGITLGQAFNKALGDKKGIRRYGHFYAPLDEALTRAVVDLSGRPGLHMDIPFTRSHVGTFDVD LFSEFFYGFVNHSWMTVHLDNLKGKNSHHQIESTFKAFARALRMACEYDERALNTLPSTKEAF
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=214, Percent_Identity=45.7943925233645, Blast_Score=173, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6324776, Length=216, Percent_Identity=42.1296296296296, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 25022; Mature: 24891
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANLTTTANIPNTAEQDPTQKLNLHGRPERIATVERITAETQVTCTVNLDGTGQGTVDT CCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCC GVPFLDHMIDQIKRHGLFDLDIKCTGDTFIDDHHSVEDTGITLGQAFNKALGDKKGIRRY CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH GHFYAPLDEALTRAVVDLSGRPGLHMDIPFTRSHVGTFDVDLFSEFFYGFVNHSWMTVHL CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE DNLKGKNSHHQIESTFKAFARALRMACEYDERALNTLPSTKEAF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TANLTTTANIPNTAEQDPTQKLNLHGRPERIATVERITAETQVTCTVNLDGTGQGTVDT CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCC GVPFLDHMIDQIKRHGLFDLDIKCTGDTFIDDHHSVEDTGITLGQAFNKALGDKKGIRRY CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH GHFYAPLDEALTRAVVDLSGRPGLHMDIPFTRSHVGTFDVDLFSEFFYGFVNHSWMTVHL CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE DNLKGKNSHHQIESTFKAFARALRMACEYDERALNTLPSTKEAF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA